Add null check

bbimber · bbimber · commit 35e5864687ac · 2024-04-30T07:58:48.000-07:00
diff --git a/SequenceAnalysis/src/org/labkey/sequenceanalysis/SequenceAnalysisMaintenanceTask.java b/SequenceAnalysis/src/org/labkey/sequenceanalysis/SequenceAnalysisMaintenanceTask.java
@@ -241,6 +241,10 @@ else if (!d.getFile().exists())
                 {
                     log.error("Missing runId: " + m.getRunId());
                 }
+                else if (run.getFilePathRootPath() == null)
+                {
+                    log.error("Run fileroot is null for runId: " + m.getRunId());
+                }
                 else
                 {
                     try (Stream<Path> stream = Files.walk(run.getFilePathRootPath()))

Original file line number	Diff line number	Diff line change
`@@ -241,6 +241,10 @@ else if (!d.getFile().exists())`
`241`	`241`	`{`
`242`	`242`	`log.error("Missing runId: " + m.getRunId());`
`243`	`243`	`}`
	`244`	`+ else if (run.getFilePathRootPath() == null)`
	`245`	`+ {`
	`246`	`+ log.error("Run fileroot is null for runId: " + m.getRunId());`
	`247`	`+ }`
`244`	`248`	`else`
`245`	`249`	`{`
`246`	`250`	`try (Stream<Path> stream = Files.walk(run.getFilePathRootPath()))`