|
228 | 228 | "from brainles_preprocessing.brain_extraction import HDBetExtractor\n", |
229 | 229 | "from brainles_preprocessing.modality import Modality\n", |
230 | 230 | "from brainles_preprocessing.preprocessor import Preprocessor\n", |
231 | | - "from brainles_preprocessing.registration import NiftyRegRegistrator\n", |
| 231 | + "from brainles_preprocessing.registration import (" |
| 232 | + " ANTsRegistrator #default", |
| 233 | + " NiftyRegRegistrator #support Linux", |
| 234 | + " eRegRegistrator #experimental", |
| 235 | + " )", |
232 | 236 | "\n", |
233 | 237 | "\n", |
234 | 238 | "def preprocess_exam_in_brats_style(inputDir: str) -> None:\n", |
|
319 | 323 | " preprocessor = Preprocessor(\n", |
320 | 324 | " center_modality=center,\n", |
321 | 325 | " moving_modalities=moving_modalities,\n", |
322 | | - " registrator=NiftyRegRegistrator(),\n", |
| 326 | + " registrator=ANTsRegistrator(),\n", |
323 | 327 | " brain_extractor=HDBetExtractor(),\n", |
324 | 328 | " # optional: we provide a temporary directory as a sandbox for the preprocessin\n", |
325 | 329 | " temp_folder=\"temporary_directory\",\n", |
|
0 commit comments