Merge pull request #14 from BrainLesion/21-feature-request-create-tutorial-in-tutorials-repo

21 feature request create tutorial in tutorials repo

Author: neuronflow

.github/workflows/release.yml

@@ -0,0 +1,2 @@
+output
+*.log

AURORA/.gitignore

@@ -0,0 +1 @@
+# Tutorials for the AURORA package

AURORA/README.md

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+import matplotlib.pyplot as plt
+import nibabel as nib
+
+
+def visualize_results(t1_file: str, segmentation_file: str):
+    t1_np = nib.load(t1_file).get_fdata().transpose(2, 1, 0)
+    seg_np = nib.load(segmentation_file).get_fdata().transpose(2, 1, 0)
+    _, ax = plt.subplots(1, 2, figsize=(8, 4))
+
+    slice_index = t1_np.shape[0] // 2  # You can choose any slice here
+    ax[0].imshow(t1_np[slice_index, :, :], cmap="gray")
+    ax[1].imshow(t1_np[slice_index, :, :], cmap="gray")
+    ax[1].imshow(seg_np[slice_index, :, :], cmap="plasma", alpha=0.3)
+    for ax in ax:
+        ax.axis("off")
+    plt.tight_layout()

AURORA/data/t1c.nii.gz

@@ -1 +1,3 @@
-# tutorials
+# Tutorials
+
+This repository provides tutorials showcasing the functionality and usage of our BrainLes packages.