initial structure for python template best practices documentation

Author: harryswift01

pages/source/best-practices.md

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+# Best Practices for Developers
+
+## Template Repositories
+
+### Python Repository Template
+
+#### Purpose of This Template
+
+#### When to Use This Template
+
+#### Creating a New Repository
+
+##### Using GitHub “Use this template”
+
+##### Initial Repository Setup
+
+#### Repository Structure
+
+##### Standard Directory Layout
+
+##### Source Code (`src/`)
+
+##### Tests (`tests/`)
+
+##### Documentation (`docs/`)
+
+#### Customising the Template
+
+##### Project Name and Package Name
+
+##### Author and Organisation Information
+
+##### Licensing
+
+##### Metadata (`pyproject.toml`)
+
+##### README Customisation
+
+#### Development Workflow
+
+##### Setting Up a Local Development Environment
+
+##### Running Tests
+
+##### Linting and Formatting
+
+##### Pre-commit Hooks (if enabled)
+
+#### Continuous Integration
+
+##### GitHub Actions Overview
+
+##### Test Workflows
+
+##### Documentation Build Checks
+
+##### Coverage Reporting
+
+#### Publishing and Releases
+
+##### Versioning Strategy
+
+##### Automated Releases
+
+##### Publishing to PyPI
+
+#### Documentation Infrastructure
+
+##### Sphinx Configuration
+
+##### Read the Docs Integration
+
+##### API Documentation Generation
+
+#### Citation and Research Credit
+
+##### CITATION.cff
+
+##### Zenodo Integration
+
+#### Secrets and Credentials
+
+##### GitHub Actions Secrets
+
+##### PyPI Tokens
+
+##### Read the Docs Webhooks
+
+#### Maintenance and Project Lifecycle
+
+##### Updating Dependencies
+
+##### Managing Releases
+
+##### Long-Term Support Considerations
+
+#### Common Pitfalls
+
+#### Further Resources