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paper/SyntheticStrain/README
@@ -10,8 +10,8 @@ nucleotides with the variant nucleotides.
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# Sequencing-Depth Test:
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For each synthetic genome, simulate 1000 datasets for each of the various number of reads
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--sacCer3 genomes sequence at 10K, 100K, 1M, and 10M reads
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--hg19 genomes sequence at 100K, 1M, 10M, and 50M reads
+-sacCer3 genomes sequence at 500K, 1M, 2M, 3M, 4M, and 5M reads
+-hg19 genomes sequence at 1M, 2M, 5M, 10M, and 20M reads
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Run them through StrainID and evaluate how often StrainID correctly identifies the
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correct strain. Time StrainID to determine how its execution speed performance.
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