cleanup hg19 run StrainID scripts

owlang · owlang · commit c72adb7e176a · 2021-10-20T09:21:21.000-04:00
The scripts for running StrainID on the human simulations were stripped of a no longer accurate comment about how the script runs.
diff --git a/paper/SyntheticStrain/job/run_StrainID_HELA_10M.pbs b/paper/SyntheticStrain/job/run_StrainID_HELA_10M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.HELA.10M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_HELA_1M.pbs b/paper/SyntheticStrain/job/run_StrainID_HELA_1M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.HELA.1M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_HELA_20M.pbs b/paper/SyntheticStrain/job/run_StrainID_HELA_20M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.HELA.20M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_HELA_2M.pbs b/paper/SyntheticStrain/job/run_StrainID_HELA_2M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.HELA.2M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_HELA_5M.pbs b/paper/SyntheticStrain/job/run_StrainID_HELA_5M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.HELA.5M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_K562_10M.pbs b/paper/SyntheticStrain/job/run_StrainID_K562_10M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.K562.10M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_K562_1M.pbs b/paper/SyntheticStrain/job/run_StrainID_K562_1M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.K562.1M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_K562_20M.pbs b/paper/SyntheticStrain/job/run_StrainID_K562_20M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.K562.20M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_K562_2M.pbs b/paper/SyntheticStrain/job/run_StrainID_K562_2M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.K562.2M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
diff --git a/paper/SyntheticStrain/job/run_StrainID_K562_5M.pbs b/paper/SyntheticStrain/job/run_StrainID_K562_5M.pbs
@@ -7,8 +7,6 @@
 #PBS -e logs/depth.sid.K562.5M.log.err
 #PBS -t 1-1000
 
-# This script will check that 1000 BAM files have been generated before executing StrainID.
-
 module load gcc/8.3.1
 module load bedtools/2.27.1
 module load bwa/0.7.15
