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Commit c38650d

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author
William Lai
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Bug fix with random coord generation
hg19 genome size incorrectly set to mm10
1 parent 4b20623 commit c38650d

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Lines changed: 1 addition & 1 deletion

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src/util/GenomeSizeReference.java

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -67,7 +67,7 @@ public static void initialize_sacCer3_cegr() {
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public static void initialize_hg19() {
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genomeName = "hg19";
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genomeSize = (long) 2.725521370E9;
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genomeSize = (long) 3.095677412E9;
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String[] chrom = {"chr1", "chr2", "chr3", "chr4", "chr5", "chr6", "chr7", "chrX", "chr8", "chr9", "chr10", "chr11", "chr12", "chr13", "chr14", "chr15", "chr16", "chr17", "chr18", "chr20", "chrY", "chr19", "chr22", "chr21"};
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chromName = new ArrayList<String>(Arrays.asList(chrom));
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long[] size = new long[] {249250621, 243199373, 198022430, 191154276, 180915260, 171115067, 159138663, 155270560, 146364022, 141213431, 135534747, 135006516, 133851895, 115169878, 107349540, 102531392, 90354753, 81195210, 78077248, 63025520, 59373566, 59128983, 51304566, 48129895};

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