From 834c6cbf2b631948f830b0783945ab2c5be529aa Mon Sep 17 00:00:00 2001 From: martenson <1814954+martenson@users.noreply.github.com> Date: Wed, 27 May 2026 11:04:42 +0000 Subject: [PATCH] Update all tools of usegalaxy.cz --- usegalaxy.cz/annotation.yml.lock | 1 + usegalaxy.cz/convert_formats.yml.lock | 1 + usegalaxy.cz/evolution.yml.lock | 1 + usegalaxy.cz/get_data.yml.lock | 2 ++ usegalaxy.cz/machine_learning.yml.lock | 6 ++++++ usegalaxy.cz/mapping.yml.lock | 2 ++ usegalaxy.cz/metagenomic_analysis.yml.lock | 15 +++++++++++++++ usegalaxy.cz/peak_calling.yml.lock | 1 + usegalaxy.cz/proteomics.yml.lock | 4 ++++ usegalaxy.cz/quality_control.yml.lock | 1 + usegalaxy.cz/rna_analysis.yml.lock | 2 ++ usegalaxy.cz/text_manipulation.yml.lock | 2 ++ usegalaxy.cz/uncategorized.yml.lock | 1 + 13 files changed, 39 insertions(+) diff --git a/usegalaxy.cz/annotation.yml.lock b/usegalaxy.cz/annotation.yml.lock index ae4c7e6..2c3e212 100644 --- a/usegalaxy.cz/annotation.yml.lock +++ b/usegalaxy.cz/annotation.yml.lock @@ -955,6 +955,7 @@ tools: - name: compleasm owner: iuc revisions: + - f421fd0c42ea - fc7334661489 tool_panel_section_id: annotation tool_panel_section_label: Annotation diff --git a/usegalaxy.cz/convert_formats.yml.lock b/usegalaxy.cz/convert_formats.yml.lock index 428e232..6b97c45 100644 --- a/usegalaxy.cz/convert_formats.yml.lock +++ b/usegalaxy.cz/convert_formats.yml.lock @@ -65,6 +65,7 @@ tools: revisions: - 28ffaaa5739f - 331a50e8fd2f + - 4493fdb346f0 - 6153e8ada1ee - 8edfcbf32616 - 9ec469ff191a diff --git a/usegalaxy.cz/evolution.yml.lock b/usegalaxy.cz/evolution.yml.lock index 1c99b6a..48cc584 100644 --- a/usegalaxy.cz/evolution.yml.lock +++ b/usegalaxy.cz/evolution.yml.lock @@ -49,6 +49,7 @@ tools: owner: iuc revisions: - 017db1b776d9 + - 1779a96f1d7c - 1aa73004ba9b - cf50aeb956f2 tool_panel_section_id: evolution diff --git a/usegalaxy.cz/get_data.yml.lock b/usegalaxy.cz/get_data.yml.lock index 850a6a0..a168f27 100644 --- a/usegalaxy.cz/get_data.yml.lock +++ b/usegalaxy.cz/get_data.yml.lock @@ -217,6 +217,7 @@ tools: - 03a801ded645 - 0f3b3813b6ae - 1e188c9610c3 + - 68f53ed7230d - 6ba50cbabbb7 - 75acf92c8fd5 - 7b925f7c50b2 @@ -244,6 +245,7 @@ tools: - name: fastq_dl owner: iuc revisions: + - 123a40edeed1 - 3f1ee30e39e9 - 41635d6d4738 - e3750180320b diff --git a/usegalaxy.cz/machine_learning.yml.lock b/usegalaxy.cz/machine_learning.yml.lock index c9ce5a2..2ecd00a 100644 --- a/usegalaxy.cz/machine_learning.yml.lock +++ b/usegalaxy.cz/machine_learning.yml.lock @@ -37,6 +37,7 @@ tools: - name: sklearn_numeric_clustering owner: bgruening revisions: + - 1bdac8249aa1 - 1dd433d2c92c - 27903ce9b4be - 37e193b3fdd7 @@ -100,6 +101,7 @@ tools: - 0630258dcf35 - 153f237ddb36 - 372582a7a34d + - 4aa3666b66fa - 4ed102b922cb - 61461e52c923 - 80852884053f @@ -396,6 +398,7 @@ tools: - 56f6ebf69ddc - 5d5d9cc554f9 - 61e76fb65daf + - 7e5631773cea - 805194c3cdfb - 845dfafac355 - 86e1e2874460 @@ -417,6 +420,7 @@ tools: - c2e2aa55dd5c - c374098d4f5c - da9f0b8ca61c + - e8694d796a7e - f5e6fb49e9ee tool_panel_section_id: machine_learning tool_panel_section_label: Machine Learning @@ -457,6 +461,7 @@ tools: - 03533fa14e77 - 1252578525d1 - 305c1229ac99 + - 3b8fa4ea9727 - 61b2d8f8811e - 679e4ede1191 - 9afec58b2bf9 @@ -549,6 +554,7 @@ tools: - name: llm_hub owner: bgruening revisions: + - 914dcb4df04c - 99898a312165 tool_panel_section_id: machine_learning tool_panel_section_label: Machine Learning diff --git a/usegalaxy.cz/mapping.yml.lock b/usegalaxy.cz/mapping.yml.lock index 944775a..e6cd238 100644 --- a/usegalaxy.cz/mapping.yml.lock +++ b/usegalaxy.cz/mapping.yml.lock @@ -13,6 +13,7 @@ tools: - 6945cd53bd2d - 8c6cd2650d1f - be1d967337e4 + - f5b1e7d2594f tool_panel_section_id: mapping tool_panel_section_label: Mapping - name: megablast_xml_parser @@ -88,6 +89,7 @@ tools: owner: iuc revisions: - 0e8330535ea0 + - 6fe0fdd63a67 - 7da532cd050c - 8fbd98f37c10 - 95ab864b281a diff --git a/usegalaxy.cz/metagenomic_analysis.yml.lock b/usegalaxy.cz/metagenomic_analysis.yml.lock index 62c0901..e1a3d54 100644 --- a/usegalaxy.cz/metagenomic_analysis.yml.lock +++ b/usegalaxy.cz/metagenomic_analysis.yml.lock @@ -782,6 +782,7 @@ tools: owner: iuc revisions: - 147577841bb8 + - 396cce609c04 - eae7ee167917 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis @@ -789,6 +790,7 @@ tools: owner: iuc revisions: - 5ded3318cf8a + - 6a9c82cc3448 - fd31cd168efc tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis @@ -796,6 +798,7 @@ tools: owner: iuc revisions: - 4d8bc5dd9e95 + - 7a5598f973c9 - 989f1256d7a9 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis @@ -804,12 +807,14 @@ tools: revisions: - 505111e8aca5 - 8b1b09fcd8b7 + - d87b60b2ed78 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis - name: concoct_merge_cut_up_clustering owner: iuc revisions: - 20ccec4a2c38 + - 28b4b21d6aae - 794d4e27925b tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis @@ -1104,6 +1109,7 @@ tools: revisions: - 2e921a1efd45 - 6b8580e02e99 + - b0b7bba11507 - bd518ee51da5 - e9168eec404c tool_panel_section_id: metagenomic_analysis @@ -1145,6 +1151,7 @@ tools: - 301a6ffaf2a2 - ac3774320d28 - dfb9413825cc + - e0b095891b28 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis - name: ampvis2_heatmap @@ -1152,6 +1159,7 @@ tools: revisions: - 16b4934fc7e7 - 1979fdd0914f + - 3e5c1fdd0e45 - 7c3248a397fd - c980e4bd48f2 tool_panel_section_id: metagenomic_analysis @@ -1170,6 +1178,7 @@ tools: owner: iuc revisions: - 028ba7c0b400 + - 24f43b62a172 - 35d71afa93f4 - 378ce300fb3d - c7d03a7b52d6 @@ -1180,6 +1189,7 @@ tools: revisions: - 0e10df6f37c6 - 414355492c32 + - 77f9ed2bb200 - c9143bcb2072 - f34ea612eecf tool_panel_section_id: metagenomic_analysis @@ -1210,6 +1220,7 @@ tools: - 354d645455cd - 37a617dca128 - 7822d7a5a496 + - a9fd4ada4d2a - bb054c50a96c tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis @@ -1217,6 +1228,7 @@ tools: owner: iuc revisions: - 2c21c267391c + - 4140e26cafbc - c5ccc28a2696 - cf0944377d87 - e913a155618b @@ -1246,6 +1258,7 @@ tools: owner: iuc revisions: - 14b38ec15fe9 + - 492eb6dcfe5c - b268ffb0e321 - ef800b2766c4 - ff07f41b8e54 @@ -1258,6 +1271,7 @@ tools: - 70a98af91147 - 76cb398e9110 - ac98ca3ff0d2 + - bc02fbdb3510 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis - name: ampvis2_timeseries @@ -1470,6 +1484,7 @@ tools: - name: kegg_pathways_completeness owner: iuc revisions: + - 78990897aa94 - 9933e2f91584 tool_panel_section_id: metagenomic_analysis tool_panel_section_label: Metagenomic Analysis diff --git a/usegalaxy.cz/peak_calling.yml.lock b/usegalaxy.cz/peak_calling.yml.lock index 9ecda37..bf95d5a 100644 --- a/usegalaxy.cz/peak_calling.yml.lock +++ b/usegalaxy.cz/peak_calling.yml.lock @@ -57,6 +57,7 @@ tools: owner: iuc revisions: - 75bf02d7d1c8 + - f6b556ba5624 - fd1f57782683 tool_panel_section_id: peak_calling tool_panel_section_label: Peak Calling diff --git a/usegalaxy.cz/proteomics.yml.lock b/usegalaxy.cz/proteomics.yml.lock index a0bdb37..86cb4db 100644 --- a/usegalaxy.cz/proteomics.yml.lock +++ b/usegalaxy.cz/proteomics.yml.lock @@ -59,6 +59,7 @@ tools: - name: maxquant owner: galaxyp revisions: + - 022e886e8f94 - 837224ad1694 - 8934bc76bb52 - 9c52362ae7bb @@ -395,6 +396,7 @@ tools: - name: metaquantome_stat owner: galaxyp revisions: + - ad0fb0956559 - b648e45fd3cf - b9d453dca8d3 tool_panel_section_id: proteomics @@ -404,6 +406,7 @@ tools: revisions: - 35cc7ca0bdc7 - a1daafbf5233 + - e5ced3896e9c tool_panel_section_id: proteomics tool_panel_section_label: Proteomics - name: metaquantome_expand @@ -417,6 +420,7 @@ tools: - name: metaquantome_db owner: galaxyp revisions: + - 491ee27f3e45 - '860429737408' - e63db1aa82ee tool_panel_section_id: proteomics diff --git a/usegalaxy.cz/quality_control.yml.lock b/usegalaxy.cz/quality_control.yml.lock index dce54f8..9f73d7c 100644 --- a/usegalaxy.cz/quality_control.yml.lock +++ b/usegalaxy.cz/quality_control.yml.lock @@ -18,6 +18,7 @@ tools: - a7e081ceb76a - abfd8a6544d7 - b2f1f75d49c4 + - bb89ae58738c - bf675f34b056 - c19b16e5729c - c1a4b5f3b432 diff --git a/usegalaxy.cz/rna_analysis.yml.lock b/usegalaxy.cz/rna_analysis.yml.lock index f13e750..75e65d4 100644 --- a/usegalaxy.cz/rna_analysis.yml.lock +++ b/usegalaxy.cz/rna_analysis.yml.lock @@ -896,6 +896,7 @@ tools: - 765e685641ce - 7acb00fc980a - a2c1c52a7e47 + - a9b4d7761b46 tool_panel_section_id: rna_analysis tool_panel_section_label: RNA Analysis - name: arriba_get_filters @@ -915,6 +916,7 @@ tools: - 3d61a698e5e1 - 45c2ec061cf9 - 6535dd4a4064 + - e1ab5699a834 - f6b8b38636a4 tool_panel_section_id: rna_analysis tool_panel_section_label: RNA Analysis diff --git a/usegalaxy.cz/text_manipulation.yml.lock b/usegalaxy.cz/text_manipulation.yml.lock index f4b7254..8f5e5d0 100644 --- a/usegalaxy.cz/text_manipulation.yml.lock +++ b/usegalaxy.cz/text_manipulation.yml.lock @@ -75,6 +75,7 @@ tools: revisions: - 3284b72eef56 - 8061668d0868 + - 8a19efbd2178 - b31219f26a8f tool_panel_section_id: text_manipulation tool_panel_section_label: Text Manipulation @@ -288,6 +289,7 @@ tools: - name: wordcloud owner: bgruening revisions: + - 45c4cc885ddb - 6055ffae8903 tool_panel_section_id: text_manipulation tool_panel_section_label: Text Manipulation diff --git a/usegalaxy.cz/uncategorized.yml.lock b/usegalaxy.cz/uncategorized.yml.lock index e61de59..0851d3b 100644 --- a/usegalaxy.cz/uncategorized.yml.lock +++ b/usegalaxy.cz/uncategorized.yml.lock @@ -25,5 +25,6 @@ tools: owner: iuc revisions: - dd2d60b55e0d + - e301c523e83d tool_panel_section_id: uncategorized tool_panel_section_label: Uncategorized