Fixed installation bug causing Galsim libraies to not be correctly li… #37

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

	name: testing

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main" ]

	permissions:
	contents: read

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.11"]

	steps:
	- name: Git checkout currect repo
	uses: actions/checkout@v3

	- name: Set up Python ${{ matrix.python-version }}
	uses: conda-incubator/setup-miniconda@v2
	with:
	python-version: ${{ matrix.python-version }}
	channels: conda-forge
	channel-priority: strict
	show-channel-urls: true

	- name: configure conda and install code
	shell: bash -l {0}
	run: \|
	conda config --set always_yes yes
	conda install mamba
	mamba install stackvana galsim pytest black fitsio \
	matplotlib astropy

	python -m pip install --upgrade pip
	pip install -U setuptools

	pip install . --user


	- name: Lint with black
	shell: bash -l {0}
	run: \|
	black src/batsim

	- name: Test with pytest
	shell: bash -l {0}
	run: \|
	pytest

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