mock test url and config for unit-tests

Author: blankdots

deploy/test/auth_test.ini

@@ -4,7 +4,7 @@
 
 [beacon_general_info]
 # Name of the Beacon service
-title=EGA Beacon
+title=GA4GHBeacon at CSC
 
 # Version of the Beacon implementation
 version=1.4.0

tests/test.ini

@@ -0,0 +1,110 @@
+# This file is used to configure the Beacon info endpoint
+# This file's default location is /beacon-python/beacon_api/conf/config.ini
+
+
+[beacon_general_info]
+# Name of the Beacon service
+title=GA4GHBeacon at CSC
+
+# Version of the Beacon implementation
+version=1.4.0
+
+# Author of this software
+author=CSC developers
+
+# Software license for this distribution
+license=Apache 2.0
+
+# Copyright holder for this software
+copyright=CSC - IT Center for Science
+
+# Documentation url for GA4GH Discovery
+docs_url=https://beacon-python.readthedocs.io/en/latest/
+
+[beacon_api_info]
+# Version of the Beacon API specification this implementation adheres to
+apiVersion=1.1.0
+
+# Globally unique identifier for this Beacon instance
+beaconId=elixir-finland
+
+# Description of this Beacon service
+description=Beacon API Web Server based on the GA4GH Beacon API
+
+# Homepage for Beacon service
+url=https://ega-archive.org/
+
+# Alternative URL for Beacon service for e.g. internal use cases
+alturl=https://ega-archive.org/
+
+# Datetime when this Beacon was created
+createtime=2018-07-25T00:00:00Z
+
+
+[handover_info]
+# The base url for all handovers
+drs=https://examplebrowser.org
+
+# Make the handovers 1- or 0-based
+handover_base = 1
+
+# Handovers for datasets
+dataset_paths=
+  Variants,browse the variants matched by the query,dataset/{dataset}/browser/variant/{chr}-{start}-{ref}-{alt}
+  Region,browse data of the region matched by the query,dataset/{dataset}/browser/region/{chr}-{start}-{end}
+  Data,retrieve information of the datasets,dataset/{dataset}/browser
+
+# Handovers for general beacon
+beacon_paths=
+  Project,retrieve information about the datasets,dataset/{dataset}
+
+
+[organisation_info]
+# Globally unique identifier for organisation that hosts this Beacon service
+org_id=CSC
+
+# Name of organisation that hosts this Beacon service
+org_name=CSC - IT Center for Science
+
+# Description for organisation
+org_description=Finnish expertise in ICT for research, education, culture and public administration
+
+# Visit address of organisation
+org_address=Keilaranta 14, Espoo, finland
+
+# Homepage of organisation
+org_welcomeUrl=https://www.csc.fi/
+
+# URL for contacting organisation
+org_contactUrl=https://www.csc.fi/contact-info
+
+# URL for organisation logo
+org_logoUrl=https://www.csc.fi/documents/10180/161914/CSC_2012_LOGO_RGB_72dpi.jpg
+
+# Other organisational information
+org_info=CSC represents Finland in the ELIXIR partner nodes
+
+[oauth2]
+# OAuth2 server that returns public key for JWT Bearer token validation
+server=http://test.csc.fi/jwk
+
+# Authenticated Bearer token issuers, separated by commas if multiple
+issuers=http://test.csc.fi
+
+# Where to check the bona_fide_status
+userinfo=http://test.csc.fi/userinfo
+
+# What the value of `AcceptedTermsAndPolicies` and `ResearcherStatus` must be in order
+# to be recognised as a Bona Fide researcher
+bona_fide_value=https://doi.org/10.1038/s41431-018-0219-y
+
+# String or URI to state the intended recipient of the token.
+# If your application is part of a larger network,
+# the network administrator should supply you with their `aud` identifier
+# in other cases, leave this empty or use the personal identifier given to you from your AAI
+audience=
+
+# Verify `aud` claim of token.
+# If your service is not part of any network or AAI, but you still want to use tokens
+# produced by other AAI parties, set this value to False to skip the audience validation step
+verify_aud=False

tests/test_app.py

@@ -29,7 +29,7 @@ def generate_token(issuer):
         "k": "hJtXIZ2uSN5kbQfbtTNWbpdmhkV8FJG-Onbc6mxCcYg"
     }
     header = {
-        "jku": "https://login.elixir-czech.org/oidc/jwk",
+        "jku": "http://test.csc.fi/jwk",
         "kid": "018c0ae5-4d9b-471b-bfd6-eef314bc7037",
         "alg": "HS256"
     }
@@ -53,7 +53,7 @@ def generate_bad_token():
         "k": "hJtXIZ2uSN5kbQfbtTNWbpdmhkV8FJG-Onbc6mxCcYg"
     }
     header = {
-        "jku": "https://login.elixir-czech.org/oidc/jwk",
+        "jku": "http://test.csc.fi/jwk",
         "kid": "018c0ae5-4d9b-471b-bfd6-eef314bc7037",
         "alg": "HS256"
     }
@@ -87,7 +87,7 @@ class AppTestCase(AioHTTPTestCase):
     @asynctest.mock.patch('beacon_api.app.initialize', side_effect=create_db_mock)
     async def get_application(self, pool_mock):
         """Retrieve web Application for test."""
-        token, public_key = generate_token('https://login.elixir-czech.org/oidc/')
+        token, public_key = generate_token('http://test.csc.fi')
         self.bad_token, _ = generate_bad_token()
         self.env = EnvironmentVarGuard()
         self.env.set('PUBLIC_KEY', json.dumps(public_key))

tests/test_response.py

@@ -113,14 +113,14 @@ async def test_bad_retrieve_user_data(self, m):
     @aioresponses()
     async def test_bad_none_retrieve_user_data(self, m):
         """Test a failing userdata call because response didn't have ga4gh format."""
-        m.get("https://login.elixir-czech.org/oidc/userinfo", payload={"not_ga4gh": [{}]})
+        m.get("http://test.csc.fi/userinfo", payload={"not_ga4gh": [{}]})
         user_data = await retrieve_user_data('good_token')
         self.assertEqual(user_data, None)
 
     @aioresponses()
     async def test_good_retrieve_user_data(self, m):
         """Test a passing call to retrieve user data."""
-        m.get("https://login.elixir-czech.org/oidc/userinfo", payload={"ga4gh": [{}]})
+        m.get("http://test.csc.fi/userinfo", payload={"ga4gh": [{}]})
         user_data = await retrieve_user_data('good_token')
         self.assertEqual(user_data, [{}])
 
@@ -140,7 +140,7 @@ async def test_get_key(self, m):
                     "e": "AQAB"
                 }
             ]}
-        m.get("https://login.elixir-czech.org/oidc/jwk", payload=data)
+        m.get("http://test.csc.fi/jwk", payload=data)
         result = await get_key()
         # key = load_pem_public_key(result.encode('utf-8'), backend=default_backend())
         self.assertTrue(isinstance(result, dict))

tox.ini

@@ -29,6 +29,8 @@ deps =
 commands = flake8 .
 
 [testenv]
+setenv =
+    CONFIG_FILE = {toxinidir}/tests/test.ini
 passenv = TRAVIS TRAVIS_*
 deps =
     .[test]