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‎tutorial/appendix/README.md‎

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These appendices provide background or technical details that did not fit the main text.
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[↩ Back to the tutorial index](../README.md)
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## A: Laplace transforms and frequency response
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1. The Laplace transform [![github](../img/github.svg)](./a-laplace/1-laplace-transforms.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/a-laplace/1-laplace-transforms.ipynb), and
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2. its use in analysing a dynamical system's frequency response [![github](../img/github.svg)](./a-laplace/2-frequency-response) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/a-laplace/2-frequency-response.ipynb), and
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1. [![github](../img/github.svg)](./a-laplace/1-laplace-transforms.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/a-laplace/1-laplace-transforms.ipynb)
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The Laplace transform, and
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2. [![github](../img/github.svg)](./a-laplace/2-frequency-response)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/a-laplace/2-frequency-response.ipynb), and
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its use in analysing a dynamical system's frequency response.
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## B: Op-amps in the VC model
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1. Ideal op amps [![github](../img/github.svg)](./b-op-amps/1-op-amp.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/b-op-amps/1-op-amp.ipynb)
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2. Models of an op amp with a finite speed [![github](../img/github.svg)](./b-op-amps/2-non-ideal-op-amp.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/b-op-amps/2-non-ideal-op-amp.ipynb)
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3. VC models based on different op-amp models [![github](../img/github.svg)](./b-op-amps/3-resulting-vc-models.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/b-op-amps/3-resulting-vc-models.ipynb)
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1. [![github](../img/github.svg)](./b-op-amps/1-op-amp.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/b-op-amps/1-op-amp.ipynb)
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Ideal op amps
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2. [![github](../img/github.svg)](./b-op-amps/2-non-ideal-op-amp.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/b-op-amps/2-non-ideal-op-amp.ipynb)
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Models of an op amp with a finite speed
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3. [![github](../img/github.svg)](./b-op-amps/3-resulting-vc-models.ipynb)[![nbviewer]
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(../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/b-op-amps/3-resulting-vc-models.ipynb)
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VC models based on different op-amp models
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## C: Series resistance compensation
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1. Correction-prediction ODEs [![github](../img/github.svg)](./c-rs/1-compensation-prediction.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/c-rs/1-compensation-prediction.ipynb)
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2. One-shot Rs and Cm estimation [![github](../img/github.svg)](./c-rs/2-rs-cm-one-shot.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/c-rs/2-rs-cm-one-shot.ipynb)
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3. Iterative Rs and Cm estimation [![github](../img/github.svg)](./c-rs/2-rs-cm-iterative.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/c-rs/2-rs-cm-iterative.ipynb)
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1. [![github](../img/github.svg)](./c-rs/1-compensation-prediction.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/c-rs/1-compensation-prediction.ipynb)
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Correction-prediction ODEs
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2. [![github](../img/github.svg)](./c-rs/2-rs-cm-one-shot.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/c-rs/2-rs-cm-one-shot.ipynb)
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One-shot Rs and Cm estimation
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3. [![github](../img/github.svg)](./c-rs/2-rs-cm-iterative.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/c-rs/2-rs-cm-iterative.ipynb)
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Iterative Rs and Cm estimation
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## D: Bessel filters
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1. Bessel low-pass filters in the Laplace domain [![github](../img/github.svg)](./d-filters/1-bessel-filters-laplace.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/d-filters/1-bessel-filters-laplace.ipynb)
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2. Bessel low-pass filters in ODE form [![github](../img/github.svg)](./d-filters/2-bessel-filters-ode.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/d-filters/2-bessel-filters-ode.ipynb)
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3. Summary of ODE forms [![github](../img/github.svg)](./d-filters/3-bessel-filter-ode-summary.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/d-filters/3-bessel-filter-ode-summary.ipynb)
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4. The stimulus filter [![github](../img/github.svg)](./d-filters/4-stimulus-filter.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/d-filters/4-stimulus-filter.ipynb)
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1. [![github](../img/github.svg)](./d-filters/1-bessel-filters-laplace.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/d-filters/1-bessel-filters-laplace.ipynb)
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Bessel low-pass filters in the Laplace domain
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2. [![github](../img/github.svg)](./d-filters/2-bessel-filters-ode.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/d-filters/2-bessel-filters-ode.ipynb)
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Bessel low-pass filters in ODE form
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3. [![github](../img/github.svg)](./d-filters/3-bessel-filter-ode-summary.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/d-filters/3-bessel-filter-ode-summary.ipynb)
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Summary of ODE forms
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4. [![github](../img/github.svg)](./d-filters/4-stimulus-filter.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/d-filters/4-stimulus-filter.ipynb)
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The stimulus filter
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## E: Voltage offsets
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1. Liquid junction potential [![github](../img/github.svg)](./e-offsets/1-liquid-junction-potential.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/e-offsets/1-liquid-junction-potential.ipynb)
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2. Offset correction [![github](../img/github.svg)](./e-offsets/2-offset-correction.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/e-offsets/2-offset-correction.ipynb)
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1. [![github](../img/github.svg)](./e-offsets/1-liquid-junction-potential.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/e-offsets/1-liquid-junction-potential.ipynb)
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Liquid junction potential
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2. [![github](../img/github.svg)](./e-offsets/2-offset-correction.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/e-offsets/2-offset-correction.ipynb)
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Offset correction
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# Z: Parameter values
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## Z: Parameter values
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1. Parameter value estimates from the literature and from different manufacturers [![github](../img/github.svg)](./z-parameters/1-parameter-values.ipynb) [![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel-new/tree/main/tutorial/appendix/z-parameters/1-parameter-values.ipynb)
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[↩ Back to the tutorial index](../README.md)
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1. [![github](../img/github.svg)](./z-parameters/1-parameter-values.ipynb)
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[![nbviewer](../img/nbviewer.svg)](https://nbviewer.jupyter.org/github/CardiacModelling/VoltageClampModel/tree/main/tutorial/appendix/z-parameters/1-parameter-values.ipynb)
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Parameter value estimates from the literature and from different manufacturers
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