pcpostprocess/.github/workflows/tests.yml at 99c12d127bbb8c46c63d724fbbc917139d0110e9 · CardiacModelling/pcpostprocess · GitHub

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name: Tests
on:
  push:
    branches:
      - main
  pull_request:
    types: [opened, synchronize, reopened, ready_for_review]
    branches:
      - '**'

jobs:
  build:
    runs-on: ubuntu-latest
    if: github.event.pull_request.draft == false

    env:
        python-latest: '3.14'
    strategy:
      matrix:
        python-version: ['3.10', '3.11', '3.12', '3.13', '3.14']

    steps:
    - name: Checkout repository
      uses: actions/checkout@v4

    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v5
      with:
        python-version: ${{ matrix.python-version }}

    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        python -m pip install -e .[dev]

    - name: Check code style with flake8
      if: ${{ matrix.python-version == env.python-latest }}
      run: |
        python -m flake8 -j4

    - name: Check typing with mypy
      if: ${{ matrix.python-version == env.python-latest }}
      run: |
        python -m mypy

    - name: Extract test data
      run: |
        wget https://cardiac.nottingham.ac.uk/syncropatch_export/test_data.tar.xz
        tar xvf test_data.tar.xz
        rm test_data.tar.xz

    - name: Run unit tests (without coverage testing)
      if: ${{ success() && matrix.python-version != env.python-latest }}
      run: python -m unittest

    - name: Run unit tests (with coverage testing)
      if: ${{ success() && matrix.python-version == env.python-latest }}
      run: coverage run -m unittest

    - name: Report coverage to codecov
      uses: codecov/codecov-action@v4
      if: ${{ success() && matrix.python-version == env.python-latest }}
      with:
        token: ${{ secrets.CODECOV_TOKEN }}