Updating tested python versions

Author: MichaelClerx

.github/workflows/pytest.yml

@@ -6,41 +6,44 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.7 ,3.8, 3.9, '3.10', 3.11]
+        python-version: [3.8, 3.9, '3.10', 3.11, 3.12, 3.13]
     steps:
     - name: Checkout repository and submodules
       uses: actions/checkout@v4
       with:
         submodules: recursive
     - name: Checkout github repo (+ download lfs dependencies)
       uses: actions/checkout@v4
-      with:
-        lfs: true
-    - name: Checkout LFS objects
-      run: git lfs checkout
 
     - name: Set up Python ${{ matrix.python-version }}
       uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
+
     - name: Install dependencies
       run: |
-        python -m pip install --upgrade pip
         python -m pip install .[test]
+
+    - name: Lint with flake8
+      run: |
+        python -m flake8 syncropatch_export/*.py tests/*.py
+
+    - name: Import sorting with isort
+      run: |
+        python -m isort --verbose --check-only --diff syncropatch_export tests setup.py
+
     - name: Download and extract test data
       run: |
         wget https://cardiac.nottingham.ac.uk/syncropatch_export/test_data.tar.xz -P tests/
         tar xvf tests/test_data.tar.xz -C tests/
+
     - name: Test with pytest
       run: |
         python -m pip install -e .
         python -m pytest --cov --cov-config=.coveragerc
+
     - uses: codecov/codecov-action@v4
       with:
         token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos
-    - name: Lint with flake8
-      run: |
-        python -m flake8 syncropatch_export/*.py tests/*.py
-    - name: Import sorting with isort
-      run: |
-        python -m isort --verbose --check-only --diff syncropatch_export tests setup.py
+      if: matrix.python-version == 3.13
+

README.md

@@ -30,7 +30,7 @@ This repository contains a python package and scripts for processing data output
 With this package you can export each sweep of each protocol for each well as individual files (.csv). 
 Meta-data describing the protocol, and variables such as membrance capacitance (Cm), Rseries and Rseal can be exported.
 
-This package has been tested on Ubuntu with Python 3.7, 3.8, 3.9, 3.10 and 3.11.
+This package is tested on Ubuntu with Python 3.8, 3.9, 3.10, 3.11, 3.12, and 3.13.
 
 ## Getting Started