ClustAssess/_pkgdown.yml at main · Core-Bioinformatics/ClustAssess · GitHub

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template:
  light-switch: true
  bootstrap: 5
navbar:
  structure:
    left: [intro, reference, articles, news, tutorials]
    right: [search, github, lightswitch]
  components:
    tutorials:
      text: "ClustAssess Shiny app Tutorial"
      href: "tutorials/index.html"
url: https://core-bioinformatics.github.io/ClustAssess/
reference:
- title: Element-Centric Scores
- contents:
  - starts_with("element_")
  - marker_overlap
  - starts_with("merge_")
  - weighted_element_consistency
- title: Clustering Assessment Pipeline
- contents:
  - starts_with("assess_")
  - starts_with("plot_")
  - starts_with("get")
  - automatic_stability_assessment
  - choose_stable_clusters
- title: Shiny App Components
- contents:
  - starts_with("ui_")
  - starts_with("server_")
  - starts_with("write_")
  - add_metadata
  - calculate_markers
  - calculate_markers_shiny
- title: Convert to other packages
- contents:
  - starts_with("create_")
- title: PAC
- contents:
  - consensus_cluster
  - starts_with("pac_")