readme.md

Esteemer Scripts

The main purpose of Esteemer stage is to promote the candidate messages that are marked as accepted by think pudding.

The esteemer script should load the Think Pudding graph, extract relevant message parts, and mark one candidate per ancestor performer in the graph as promoted based on some criteria (tbd).

Install the Esteemer package globally

pip install [/path/or/url/to/esteemer-0.1.0-py3-none-any.whl]

Installing the Esteemer package in development mode

pip install -e [path/to/module/displaylab/esteemer/python]

Running the Esteemer script

python -m esteemer.esteemer [/path/to/spek_tp.json][/path/to/spek_preferences.json][/path/to/spek_message_id.json][/path/to/spek_history.json]

Running the pfp pipeline (pfp.sh)

Note: This assumes that you installed the pfp pipeline installed and you have installed the esteemer package

cd $DISPLAY_LAB_HOME/vert-ramp-affirmation/vignettes/aspire
./$DISPLAY_LAB_HOME/vert-ramp-affirmation/pfp.sh

See vert-ramp-affirmation readme docs for more info

How it works

Query inside

    PREFIX slowmo: <http://example.com/slowmo#>
    construct {
    ?candidate ?p ?o .
    ?candidate obo:RO_0000091 ?disposition .
    ?disposition ?p2 ?o2 .
    ?candidate slowmo:acceptable_by ?o3 .
    }
    WHERE {
    ?candidate a obo:cpo_0000053 .
    ?candidate slowmo:AncestorPerformer ?performer .
    ?candidate obo:RO_0000091 ?disposition .
    ?candidate ?p ?o .
    ?disposition ?p2 ?o2 .
    ?candidate slowmo:acceptable_by ?o3 .
    }

Esteemer

Evaluate acceptable candidates for promotion to figure generation.

Use (in progress):

Options:

• -h | --help print help and exit
• -p | --pathways path to causal pathways
• -s | --spek path to spek file (default to stdin)

Default Esteemer Criteria

Provides a passthrough for all acceptable candidates. Any candidate that is acceptable_by is annotated as promoted_by http://example.com/slowmo#esteemer_default_criteria