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_sources/config_examples.md

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@@ -30,7 +30,7 @@ Our internal configurations for each pipeline are as follows:
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| APP_NAME | 'PROJECT_NAME_Zproj' |'PROJECT_NAME_Illum' | 'PROJECT_NAME_QC' |' PROJECT_NAME_AssayDev' | 'PROJECT_NAME_Analysis' | If the PROJECT_NAME is excessively long you can enter a truncated version of it here but you will need to be careful to use the correct version in subsequent steps in the protocol. (e.g. 2021_06_08_WCPC_Zproj) |
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| LOG_GROUP_NAME | APP_NAME | APP_NAME | APP_NAME | APP_NAME |APP_NAME | We never change this. |
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| DOCKERHUB_TAG | 'cellprofiler/distributed-cellprofiler:2.0.0_4.2.4' | 'cellprofiler/distributed-cellprofiler:2.0.0_4.2.4' | 'cellprofiler/distributed-cellprofiler:2.0.0_4.2.4' | 'cellprofiler/distributed-cellprofiler:2.0.0_4.2.4' | 'cellprofiler/distributed-cellprofiler:2.0.0_4.2.4' | Ensure the CP tag number matches the version of CellProfiler for your pipeline (can easily see by opening the pipeline in a text editor and looking for the 3rd line “DateRevision: 413”). |
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| DOCKERHUB_TAG | 'cellprofiler/distributed-cellprofiler:2.2.0_4.2.8' | 'cellprofiler/distributed-cellprofiler:2.2.0_4.2.8' | 'cellprofiler/distributed-cellprofiler:2.2.0_4.2.8' | 'cellprofiler/distributed-cellprofiler:2.2.0_4.2.8' | 'cellprofiler/distributed-cellprofiler:2.2.0_4.2.8' | Ensure the CP tag number matches the version of CellProfiler for your pipeline (can easily see by opening the pipeline in a text editor and looking for the 3rd line “DateRevision: 413”). |
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| AWS_REGION | 'us-east-1' | 'us-east-1' | 'us-east-1' | 'us-east-1' | 'us-east-1' | |
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| AWS_PROFILE | 'default' | 'default' | 'default' | 'default' | 'default' | |
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| SSH_KEY_NAME | 'YOURPEM.pem' | 'YOURPEM.pem' | 'YOURPEM.pem' | 'YOURPEM.pem' | 'YOURPEM.pem' | |

config_examples.html

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@@ -467,11 +467,11 @@ <h1>config.py configuration examples<a class="headerlink" href="#config-py-confi
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<td><p>We never change this.</p></td>
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</tr>
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<tr class="row-even"><td><p>DOCKERHUB_TAG</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.0.0_4.2.4</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.0.0_4.2.4</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.0.0_4.2.4</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.0.0_4.2.4</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.0.0_4.2.4</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.2.0_4.2.8</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.2.0_4.2.8</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.2.0_4.2.8</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.2.0_4.2.8</p></td>
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<td><p>‘cellprofiler/distributed-cellprofiler:2.2.0_4.2.8</p></td>
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<td><p>Ensure the CP tag number matches the version of CellProfiler for your pipeline (can easily see by opening the pipeline in a text editor and looking for the 3rd line “DateRevision: 413”).</p></td>
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</tr>
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<tr class="row-odd"><td><p>AWS_REGION</p></td>

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