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mnlevy1981mnlevy1981
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Merge pull request #231 from mnlevy1981/update_MARBL_FeForcing
Update marbl iron forcing
2 parents 7ba8ebc + edfd557 commit 42dc926

7 files changed

Lines changed: 38 additions & 16 deletions

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‎.gitmodules‎

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Original file line numberDiff line numberDiff line change
@@ -2,7 +2,7 @@
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path = MOM6
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url = https://github.com/NCAR/MOM6.git
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fxDONOTUSEurl = https://github.com/NCAR/MOM6.git
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fxtag = dev/ncar_251120
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fxtag = dev/ncar_260310
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fxrequired = AlwaysRequired
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[submodule "stochastic_physics"]
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path = externals/MARBL
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url = https://github.com/marbl-ecosys/MARBL.git
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fxDONOTUSEurl = https://github.com/marbl-ecosys/MARBL.git
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fxtag = marbl0.48.3
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fxtag = marbl0.49.0
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fxrequired = AlwaysRequired
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‎MOM6‎

Submodule MOM6 updated 68 files

‎externals/MARBL‎

Submodule MARBL updated 43 files

‎param_templates/MOM_input.yaml‎

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@@ -340,15 +340,22 @@ Global:
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for the MARBL tracer package."
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datatype: string
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value:
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$MARBL_CONFIG == "latest": ecosys_jan_IC_omip_latlon_1x1_180W_c230331.nc
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$MARBL_CONFIG == "latest+4p2z": ecosys_jan_IC_omip_latlon_1x1_180W_c231221.nc
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$MARBL_CONFIG == "latest": ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc
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$MARBL_CONFIG == "latest+4p2z": ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc
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MARBL_FESEDFLUX_FILE:
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description: |
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"Name of file containing iron sediment flux
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forcing field for the MARBL tracer package."
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datatype: string
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value:
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'"BASE_BIO_ON=TRUE" in $MARBL_TRACER_OPTS and $OCN_GRID == "tx2_3v2"': fesedflux_total_reduce_oxic_tx2_3v2.c231205.nc
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'"BASE_BIO_ON=TRUE" in $MARBL_TRACER_OPTS and $OCN_GRID == "tx2_3v2"': fesedflux_2024algo_tx2_3v2.c251229.nc
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MARBL_FESEDFLUXRED_FILE:
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description: |
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"Name of file containing iron reducing sediment flux
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forcing field for the MARBL tracer package."
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datatype: string
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value:
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'"BASE_BIO_ON=TRUE" in $MARBL_TRACER_OPTS and $OCN_GRID == "tx2_3v2"': fesedfluxRed_2024algo_tx2_3v2.c251229.nc
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MARBL_FEVENTFLUX_FILE:
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description: |
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"Name of file containing iron sediment flux

‎param_templates/input_data_list.yaml‎

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@@ -50,11 +50,14 @@ mom.input_data_list:
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DIAG_COORD_DEF_RHO2:
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$OCN_GRID == "tx2_3v2": "${INPUTDIR}/ocean_rho2_190917.nc"
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MARBL_TRACERS_IC_FILE:
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$MARBL_CONFIG == "latest": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c230331.nc"
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$MARBL_CONFIG == "latest+4p2z": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c231221.nc"
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$MARBL_CONFIG == "latest": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc"
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$MARBL_CONFIG == "latest+4p2z": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc"
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MARBL_FESEDFLUX_FILE:
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'"BASE_BIO_ON=TRUE" in $MARBL_TRACER_OPTS':
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$OCN_GRID == "tx2_3v2": "${INPUTDIR}/fesedflux_total_reduce_oxic_tx2_3v2.c231205.nc"
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$OCN_GRID == "tx2_3v2": "${INPUTDIR}/fesedflux_2024algo_tx2_3v2.c251229.nc"
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MARBL_FESEDFLUXRED_FILE:
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'"BASE_BIO_ON=TRUE" in $MARBL_TRACER_OPTS':
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$OCN_GRID == "tx2_3v2": "${INPUTDIR}/fesedfluxRed_2024algo_tx2_3v2.c251229.nc"
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MARBL_FEVENTFLUX_FILE:
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'"BASE_BIO_ON=TRUE" in $MARBL_TRACER_OPTS':
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$OCN_GRID == "tx2_3v2": "${INPUTDIR}/feventflux_5gmol_tx2_3v2.c231205.nc"

‎param_templates/json/MOM_input.json‎

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@@ -243,15 +243,22 @@
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"description": "\"Name of file containing initial conditions\nfor the MARBL tracer package.\"\n",
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"datatype": "string",
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"value": {
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"$MARBL_CONFIG == \"latest\"": "ecosys_jan_IC_omip_latlon_1x1_180W_c230331.nc",
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"$MARBL_CONFIG == \"latest+4p2z\"": "ecosys_jan_IC_omip_latlon_1x1_180W_c231221.nc"
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"$MARBL_CONFIG == \"latest\"": "ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc",
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"$MARBL_CONFIG == \"latest+4p2z\"": "ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc"
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}
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},
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"MARBL_FESEDFLUX_FILE": {
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"description": "\"Name of file containing iron sediment flux\n forcing field for the MARBL tracer package.\"\n",
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"datatype": "string",
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"value": {
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"\"BASE_BIO_ON=TRUE\" in $MARBL_TRACER_OPTS and $OCN_GRID == \"tx2_3v2\"": "fesedflux_total_reduce_oxic_tx2_3v2.c231205.nc"
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"\"BASE_BIO_ON=TRUE\" in $MARBL_TRACER_OPTS and $OCN_GRID == \"tx2_3v2\"": "fesedflux_2024algo_tx2_3v2.c251229.nc"
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}
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},
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"MARBL_FESEDFLUXRED_FILE": {
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"description": "\"Name of file containing iron reducing sediment flux\n forcing field for the MARBL tracer package.\"\n",
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"datatype": "string",
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"value": {
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"\"BASE_BIO_ON=TRUE\" in $MARBL_TRACER_OPTS and $OCN_GRID == \"tx2_3v2\"": "fesedfluxRed_2024algo_tx2_3v2.c251229.nc"
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}
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},
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"MARBL_FEVENTFLUX_FILE": {

‎param_templates/json/input_data_list.json‎

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@@ -66,12 +66,17 @@
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"$OCN_GRID == \"tx2_3v2\"": "${INPUTDIR}/ocean_rho2_190917.nc"
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},
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"MARBL_TRACERS_IC_FILE": {
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"$MARBL_CONFIG == \"latest\"": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c230331.nc",
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"$MARBL_CONFIG == \"latest+4p2z\"": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c231221.nc"
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"$MARBL_CONFIG == \"latest\"": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc",
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"$MARBL_CONFIG == \"latest+4p2z\"": "${INPUTDIR}/ecosys_jan_IC_omip_latlon_1x1_180W_c250613.nc"
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},
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"MARBL_FESEDFLUX_FILE": {
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"\"BASE_BIO_ON=TRUE\" in $MARBL_TRACER_OPTS": {
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"$OCN_GRID == \"tx2_3v2\"": "${INPUTDIR}/fesedflux_total_reduce_oxic_tx2_3v2.c231205.nc"
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"$OCN_GRID == \"tx2_3v2\"": "${INPUTDIR}/fesedflux_2024algo_tx2_3v2.c251229.nc"
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}
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},
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"MARBL_FESEDFLUXRED_FILE": {
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"\"BASE_BIO_ON=TRUE\" in $MARBL_TRACER_OPTS": {
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"$OCN_GRID == \"tx2_3v2\"": "${INPUTDIR}/fesedfluxRed_2024algo_tx2_3v2.c251229.nc"
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}
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},
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"MARBL_FEVENTFLUX_FILE": {

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