Simplify README with project vision and create comprehensive document… #18
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| name: CI | |
| on: | |
| push: | |
| branches: [ main, develop ] | |
| pull_request: | |
| branches: [ main, develop ] | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10', '3.11', '3.12'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install uv | |
| run: pip install uv | |
| - name: Install dependencies | |
| run: | | |
| uv sync --extra dev --extra logging | |
| - name: Test imports | |
| run: | | |
| uv run python -c " | |
| import neon_tree_classification | |
| from neon_tree_classification import NeonCrownDataset | |
| from scripts.get_dataloaders import get_dataloaders | |
| print('All imports successful!') | |
| " | |
| - name: Run tests | |
| run: uv run pytest tests/ -v --tb=short | |
| test-with-processing: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: Install R and development dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y r-base r-base-dev libtirpc-dev | |
| - name: Install uv | |
| run: pip install uv | |
| - name: Install all dependencies including processing | |
| run: | | |
| uv sync --all-extras | |
| - name: Test processing imports | |
| run: | | |
| uv run python -c " | |
| import neon_tree_classification | |
| from neon_tree_classification import NeonCrownDataset | |
| print('Core imports successful!') | |
| try: | |
| import rpy2 | |
| print('Processing dependencies (rpy2) available!') | |
| except ImportError as e: | |
| print(f'Processing dependencies not available: {e}') | |
| " | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: Install uv | |
| run: pip install uv | |
| - name: Install dependencies | |
| run: | | |
| uv sync --extra dev | |
| - name: Check code formatting | |
| run: uv run black --check neon_tree_classification/ examples/ scripts/ tests/ |