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Copyrights added to core program sources
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src/msgseqtk-align.cpp

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/*******************************************************************************
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* This file is part of MSGseqTK, a Metagenomics Shot-Gun sequencing ToolKit
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* for ultra-fast and accurate MSG-seq cleaning, mapping and more,
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* based on space-efficient FM-index on entire collection of meta-genomics sequences.
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* Copyright (C) 2020 Qi Zheng
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*
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* MSGseqTK is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* MSGseqTK is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with MSGseqTK. If not, see <http://www.gnu.org/licenses/>.
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*******************************************************************************/
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/*
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* msgseqtk-align.cpp
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*

src/msgseqtk-anno.cpp

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/*******************************************************************************
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* This file is part of MSGseqTK, a Metagenomics Shot-Gun sequencing ToolKit
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* for ultra-fast and accurate MSG-seq cleaning, mapping and more,
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* based on space-efficient FM-index on entire collection of meta-genomics sequences.
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* Copyright (C) 2020 Qi Zheng
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*
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* MSGseqTK is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* MSGseqTK is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with MSGseqTK. If not, see <http://www.gnu.org/licenses/>.
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*******************************************************************************/
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/*
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* msgseqtk-anno.cpp
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* Annotate a pre-built MSGseqTK database

src/msgseqtk-build.cpp

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* This file is part of MSGseqTK, a Metagenomics Shot-Gun sequencing ToolKit
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* for ultra-fast and accurate MSG-seq cleaning, mapping and more,
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* based on space-efficient FMD-index on entire collection of meta-genomics sequences.
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* Copyright (C) 2018 Qi Zheng
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* Copyright (C) 2018, 2019 Qi Zheng
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*
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* MSGseqTK is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by

src/msgseqtk-clean.cpp

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* This file is part of MSGseqTK, a Metagenomics Shot-Gun sequencing ToolKit
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* for ultra-fast and accurate MSG-seq cleaning, mapping and more,
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* based on space-efficient FMD-index on entire collection of meta-genomics sequences.
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* Copyright (C) 2018 Qi Zheng
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* Copyright (C) 2018, 2019 Qi Zheng
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*
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* MSGseqTK is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by

src/msgseqtk-inspect.cpp

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* This file is part of MSGseqTK, a Metagenomics Shot-Gun sequencing ToolKit
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* for ultra-fast and accurate MSG-seq cleaning, mapping and more,
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* based on space-efficient FMD-index on entire collection of meta-genomics sequences.
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* Copyright (C) 2018 Qi Zheng
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* Copyright (C) 2018, 2019 Qi Zheng
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*
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* MSGseqTK is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by

src/msgseqtk-mergedb.cpp

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* This file is part of MSGseqTK, a Metagenomics Shot-Gun sequencing ToolKit
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* for ultra-fast and accurate MSG-seq cleaning, mapping and more,
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* based on space-efficient FMD-index on entire collection of meta-genomics sequences.
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* Copyright (C) 2018 Qi Zheng
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* Copyright (C) 2018, 2019 Qi Zheng
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*
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* MSGseqTK is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by

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