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JaneliaSciComp/easifish: Changelog

  • Added spots count and spots intensities

  • Added spots warping using Bigstream

  • Added RS-FISH module for spot extraction

  • Support two methods to merge labels from neighboring regions from adjacent blocks that were segmented indenpendently using a distributed segmentation.

  • Run volume segmentation using distributed Cellpose.

47686d8 - 08/05/20024

  • Use a single Dask cluster to run all registrations

  • Run round registration using Bigstream

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

v1.0dev - [date]

Initial release of JaneliaSciComp/easifish, created with the nf-core template.

Added

Fixed

Dependencies

Deprecated