replaced prints with log

cgoina · cgoina · commit e905e0d622f1 · 2021-02-23T23:07:40.000-05:00
diff --git a/workflows/registration.nf b/workflows/registration.nf
@@ -296,7 +296,7 @@ workflow registration {
             r
         }
     }
-    final_transform_inputs.subscribe { println "Final warp input: $it" }
+    final_transform_inputs.subscribe { log.debug "Final warp input: $it" }
 
     // run the final transformation and generate the warped image
     def final_transform_res = final_transform(
@@ -308,7 +308,7 @@ workflow registration {
         final_transform_inputs.map { it[5] },
         final_transform_inputs.map { it[6] }
     )
-    final_transform_res.subscribe { println "Final warp result: $it" }
+    final_transform_res.subscribe { log.debug "Final warp result: $it" }
 
     registration_res = final_transform_res
     | groupTuple(by: [0,2,4,5])

Original file line number	Diff line number	Diff line change
`@@ -296,7 +296,7 @@ workflow registration {`
`296`	`296`	`r`
`297`	`297`	`}`
`298`	`298`	`}`
`299`		`- final_transform_inputs.subscribe { println "Final warp input: $it" }`
	`299`	`+ final_transform_inputs.subscribe { log.debug "Final warp input: $it" }`
`300`	`300`
`301`	`301`	`// run the final transformation and generate the warped image`
`302`	`302`	`def final_transform_res = final_transform(`
`@@ -308,7 +308,7 @@ workflow registration {`
`308`	`308`	`final_transform_inputs.map { it[5] },`
`309`	`309`	`final_transform_inputs.map { it[6] }`
`310`	`310`	`)`
`311`		`- final_transform_res.subscribe { println "Final warp result: $it" }`
	`311`	`+ final_transform_res.subscribe { log.debug "Final warp result: $it" }`
`312`	`312`
`313`	`313`	`registration_res = final_transform_res`
`314`	`314`	`\| groupTuple(by: [0,2,4,5])`