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README.md

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Reference genome:

  1. Homo_sapiens.GRCh38.81.gtf
  2. Homo_sapiens.GRCh38.dna.primary_assembly.fa

Package versions:

  1. STAR: STAR/2.7.11a-GCC-12.3.0
  2. Trimmomatic: Trimmomatic/0.40-Java-17
  3. FastQC: FastQC/0.12.1-Java-11
  4. BamTools: BamTools/2.5.2-GCC-12.3.0
  5. SAMTools: SAMtools/1.18-GCC-12.3.0
  6. multiqc: MultiQC/1.28-foss-2024a