BimberLabKeyModules/PMR/resources/etls/pmr-demographics.xml at 9d2960bfadae87ec8cb1a20942fc5934d9dbbdb6 · LabKey/BimberLabKeyModules · GitHub

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<?xml version="1.0" encoding="UTF-8"?>
<etl xmlns="http://labkey.org/etl/xml" standalone="false">
    <name>PRIMe_Demographics</name>
    <description>PRIMe Demographics Data</description>
    <transforms>
        <transform id="dataset1" type="RemoteQueryTransformStep">
            <source schemaName="study" queryName="demographics" remoteSource="EHR_ClinicalSource" timestampColumnName="modified">
                <sourceColumns>
                    <column>Id</column>
                    <column>date</column>
                    <column>gender</column>
                    <column>species</column>
                    <column>geographic_origin</column>
                    <column>birth</column>
                    <column>death</column>
                    <column>status</column>
                    <column>calculated_status</column>
                    <column>QCState/Label</column>
                    <column>objectid</column>
                    <column>created</column>
                    <column>modified</column>
                </sourceColumns>
            </source>
            <destination schemaName="study" queryName="demographics" targetOption="truncate" bulkLoad="true" batchSize="2500">
                <columnTransforms>
                    <column source="QCState/Label" target="QCStateLabel"/>
                </columnTransforms>
                <alternateKeys>
                    <column name="Id"/>
                </alternateKeys>
            </destination>
        </transform>
    </transforms>

<!--    <incrementalFilter className="ModifiedSinceFilterStrategy" timestampColumnName="modified" >-->
<!--        &lt;!&ndash; TODO: enable once PRIMe deploys 23.7 &ndash;&gt;-->
<!--        &lt;!&ndash;<deletedRowsSource remoteSource="EHR_ClinicalSource" schemaName="AuditSummary" queryName="DatasetUpdateAuditLog" deletedSourceKeyColumnName="primaryKey" targetKeyColumnName="objectid"/>&ndash;&gt;-->
<!--    </incrementalFilter>-->
    <schedule>
        <!--11PM-->
        <cron expression="0 0 23 * * ?"/>
    </schedule>
</etl>