quickLinks.html

<style type="text/css">
    ul.mgapList {
        padding-left: 20px;
        padding-top: 5px;
    }
</style>

<script type="text/javascript" nonce="<%=scriptNonce%>">
    Ext4.onReady(function (){
        var releaseId = mGAP.Utils.getMGapReleaseId();
        var jbrowseId = mGAP.Utils.getMGapJBrowseSession();
        var humanJbrowseId = mGAP.Utils.getHumanMGapJBrowseSession();
        var releaseHasLuceneIndex = mGAP.Utils.releaseHasLuceneIndex();
        if (releaseId){
            Ext4.fly(Ext4.query('#currentReleaseDiv')[0]).update(
                '<span>Current Release:</span>' +
                '<ul class="mgapList">' +
                    '<li><a href="' + LABKEY.ActionURL.buildURL('mgap', 'variantList', null) + '">Predicted Damaging Variants</a></li>' +
                    (jbrowseId ? '<li><a href="' + LABKEY.ActionURL.buildURL('jbrowse', 'browser', null, {database: jbrowseId}) + '">Genome Browser (Macaque)</a></li>' : '') +
                    (humanJbrowseId ? '<li><a href="' + LABKEY.ActionURL.buildURL('jbrowse', 'browser', null, {database: humanJbrowseId}) + '">Genome Browser (Human)</a></li>' : '') +
                    (releaseHasLuceneIndex ? '<li><a href="' + LABKEY.ActionURL.buildURL('mgap', 'genomeBrowser', null, {target: 'variantSearch'}) + '">Full-text Variant Search</a></li>' : '') +
                '</ul>'
            );
        }
    });

</script>

<span id="currentReleaseDiv"></span>
<p></p>
<span>Other Links:</span><br>
<ul class="mgapList">
    <li><a href="<%=contextPath%>/project/<%=containerPath%>/begin.view?pageId=variants" >All Variant Catalog Releases</a></li>
    <li><a href="<%=contextPath%>/project/<%=containerPath%>/begin.view?pageId=datasets" >Raw Sequence Data</a></li>
    <li><a href="<%=contextPath%>/mgap/<%=containerPath%>/annotation.view" >Annotation Strategy</a></li>
    <li><a href="<%=contextPath%>/mgap/<%=containerPath%>/externalData.view" >Datasets and Cohorts</a></li>
</ul>

<br>
<div style="max-width: 350px;">
We'd love to hear your feedback!  <a href="<%=contextPath%><%=containerPath%>/mgap-contact.view">Click here</a> to send a help or feature request, or email <a href="mailto:mgap@ohsu.edu">mgap@ohsu.edu</a> for any questions.
</div>