Increase RAM for kinship tasks

Author: bbimber

primeseq/src/org/labkey/primeseq/pipeline/SequenceJobResourceAllocator.java

@@ -53,6 +53,11 @@ private boolean isSequenceNormalizationTask(PipelineJob job)
         return (job.getActiveTaskId() != null && job.getActiveTaskId().getNamespaceClass().getName().endsWith("SequenceNormalizationTask"));
     }
 
+    private boolean isGeneticsTask(PipelineJob job)
+    {
+        return (job.getActiveTaskId() != null && job.getActiveTaskId().getNamespaceClass().getName().endsWith("GeneticCalculationsRTask"));
+    }
+
     private boolean isLuceneIndexJob(PipelineJob job)
     {
         return (job.getActiveTaskId() != null && job.getActiveTaskId().getNamespaceClass().getName().endsWith("JBrowseLuceneTask"));
@@ -95,6 +100,7 @@ public Integer getMaxRequestCpus(PipelineJob job)
             job.getLogger().debug("setting max CPUs to 8");
             return 8;
         }
+
         if (isLuceneIndexJob(job))
         {
             job.getLogger().debug("setting max CPUs to 24");
@@ -152,6 +158,12 @@ public Integer getMaxRequestMemory(PipelineJob job)
             return 48;
         }
 
+        if (isGeneticsTask(job))
+        {
+            job.getLogger().debug("setting memory to 72");
+            return 72;
+        }
+
         if (isCacheAlignerIndexesTask(job))
         {
             job.getLogger().debug("setting memory to 48");