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singlecell/resources/chunks/FindClustersAndDimRedux.R
@@ -1,3 +1,10 @@
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+if (!reticulate::py_module_available(module = 'leidenalg')) {
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+ logger::log_warn('python leidenalg not found!')
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+ logger::log_warn(paste0('Python available: ', reticulate::py_available()))
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+ logger::log_warn(reticulate::py_config())
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+ logger::log_warn(paste0('installed packages: ', paste0(reticulate::py_list_packages()$package, collapse = ', ')))
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+}
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+
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for (datasetId in names(seuratObjects)) {
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printName(datasetId)
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seuratObj <- readSeuratRDS(seuratObjects[[datasetId]])
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