major refactoring and bug fixes

Author: Lekssays

.env.example

@@ -31,7 +31,7 @@ QUERY_CACHE_ENABLED=true
 QUERY_CACHE_TTL=300
 
 # Storage
-WORKSPACE_ROOT=/tmp/joern-mcp
+WORKSPACE_ROOT=/tmp/codebadger-toolkit
 CLEANUP_ON_SHUTDOWN=true
 
 # GitHub (optional)

.gitignore

@@ -122,7 +122,7 @@ dmypy.json
 # Pyre type checker
 .pyre/
 
-# Joern MCP specific
+# CodeBadger Toolkit specific
 /tmp/joern_*
 *.cpg
 *.bin