Python wrapper with test for Legendre transform

Author: Dag Sverre Seljebotn

.gitignore

@@ -1,6 +1,9 @@
 *.o
+*.so
 #*
 *~
+*.pyc
+*.pyo
 
 /auto
 /autom4te.cache
@@ -9,3 +12,5 @@
 /config/config.auto
 /configure
 /sharp_oracle.inc
+
+/python/libsharp/libsharp.c

Makefile

@@ -61,3 +61,10 @@ perftest: compile_all
 
 genclean:
 	rm libsharp/sharp_legendre.c || exit 0
+
+pytest:
+	rm python/libsharp/libsharp.so || exit 0
+	cd python && LIBSHARP_INCLUDE=$(INCDIR) LIBSHARP_LIB=$(LIBDIR) python setup.py build_ext --inplace
+	cd python && nosetests libsharp
+
+

python/fake_pyrex/Pyrex/Distutils/__init__.py

@@ -0,0 +1 @@
+# work around broken setuptools monkey patching

python/fake_pyrex/Pyrex/Distutils/build_ext.py

@@ -0,0 +1 @@
+build_ext = "yes, it's there!"

python/fake_pyrex/Pyrex/__init__.py

@@ -0,0 +1 @@
+# work around broken setuptools monkey patching

python/fake_pyrex/README

@@ -0,0 +1,2 @@
+This directory is here to fool setuptools into building .pyx files
+even if Pyrex is not installed. See ../setup.py.

python/libsharp/__init__.py

@@ -0,0 +1 @@
+from .libsharp import *

python/libsharp/libsharp.pyx

@@ -0,0 +1,41 @@
+import numpy as np
+
+cdef extern from "sharp.h":
+    ctypedef long ptrdiff_t
+
+    void sharp_legendre_transform_s(float *bl, float *recfac, ptrdiff_t lmax, float *x,
+                                    float *out, ptrdiff_t nx)
+    void sharp_legendre_transform(double *bl, double *recfac, ptrdiff_t lmax, double *x,
+                                  double *out, ptrdiff_t nx)
+    void sharp_legendre_transform_recfac(double *r, ptrdiff_t lmax)
+    void sharp_legendre_transform_recfac_s(float *r, ptrdiff_t lmax)
+
+
+def legendre_transform(x, bl, out=None):
+    if out is None:
+        out = np.empty_like(x)
+    if x.dtype == np.float64:
+        if bl.dtype != np.float64:
+            bl = bl.astype(np.float64)
+        return _legendre_transform(x, bl, out=out)
+    elif x.dtype == np.float32:
+        if bl.dtype != np.float32:
+            bl = bl.astype(np.float32)
+        return _legendre_transform_s(x, bl, out=out)
+    else:
+        raise ValueError("unsupported dtype")
+
+
+def _legendre_transform(double[::1] x, double[::1] bl, double[::1] out):
+    if out.shape[0] != x.shape[0]:
+        raise ValueError('x and out must have same shape')
+    sharp_legendre_transform(&bl[0], NULL, bl.shape[0] - 1, &x[0], &out[0], x.shape[0])
+    return np.asarray(out)
+
+
+def _legendre_transform_s(float[::1] x, float[::1] bl, float[::1] out):
+    if out.shape[0] != x.shape[0]:
+        raise ValueError('x and out must have same shape')
+    sharp_legendre_transform_s(&bl[0], NULL, bl.shape[0] - 1, &x[0], &out[0], x.shape[0])
+    return np.asarray(out)
+

python/libsharp/tests/__init__.py

@@ -0,0 +1 @@
+# empty

python/libsharp/tests/test_legendre.py

@@ -0,0 +1,29 @@
+import numpy as np
+from scipy.special import legendre
+import libsharp
+
+
+def test_legendre_transform():
+    lmax = 20
+    ntheta = 19
+
+    l = np.arange(lmax + 1)
+    bl = np.exp(-l*(l+1))
+    bl *= (2 * l + 1)
+
+    theta = np.linspace(0, np.pi, ntheta, endpoint=True)
+    x = np.cos(theta)
+
+    # Compute truth using scipy.special.legendre
+    P = np.zeros((ntheta, lmax + 1))
+    for l in range(lmax + 1):
+        P[:, l] = legendre(l)(x)
+    y0 = np.dot(P, bl)
+
+    # double-precision
+    y = libsharp.legendre_transform(x, bl)
+    assert np.max(np.abs(y - y) / np.abs(y)) < 1e-12
+
+    # single-precision
+    y32 = libsharp.legendre_transform(x.astype(np.float32), bl)
+    assert np.max(np.abs(y32 - y) / np.abs(y32)) < 1e-4