Skip to content

change --containerize to apptainer instead of Dockerfile format #3

@m-jahn

Description

@m-jahn
  • the latest Snakemake now supports containerization recipes in Dockerfile and apptainer format
  • this makes the use of spython conversion of Dockerfile to singularity/apptainer recipe unnecessary
  • need to test and then change the deploy container workflow accordingly

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions