Merge pull request #168 from MiraGeoscience/DEVOPS-922

DEVOPS-922: build a Python environment for Analyst 4.7 development

Author: sebhmg

.pre-commit-config.yaml

@@ -11,11 +11,11 @@ ci:
     autoupdate_schedule: monthly
 
 repos:
--   repo: https://github.com/python-poetry/poetry
-    rev: 2.1.3
-    hooks:
-    -   id: poetry-check
-        args: [--no-plugins]
+# -   repo: https://github.com/python-poetry/poetry  # TODO: re-enable with pixi (does not support source=pypi)
+#     rev: 2.1.3
+#     hooks:
+#     -   id: poetry-check
+#         args: [--no-plugins]
 -   repo: https://github.com/hadialqattan/pycln
     rev: v2.5.0
     hooks:

environments/py-3.10-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 74368e25e3bc7f296b5e75d62111e2e2fe76bb281b8ce76523ee238f01e372c7
+# input_hash: d5d664277c158311e886351e8bc2c395673c8d474109bf131ed783441dbcccd0
 
 channels:
   - conda-forge
@@ -25,7 +25,6 @@ dependencies:
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
-  - jinja2=3.1.6=pyhd8ed1ab_0
   - keyutils=1.6.3=hb9d3cd8_0
   - krb5=1.21.3=h659f571_0
   - lcms2=2.17=h717163a_0
@@ -64,7 +63,6 @@ dependencies:
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
   - libzlib=1.3.1=hb9d3cd8_2
-  - markupsafe=3.0.3=py310h3406613_0
   - mccabe=0.7.0=pyhd8ed1ab_1
   - ncurses=6.5=h2d0b736_3
   - numpy=1.26.4=py310hb13e2d6_0
@@ -102,7 +100,7 @@ dependencies:
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-linux-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 74368e25e3bc7f296b5e75d62111e2e2fe76bb281b8ce76523ee238f01e372c7
+# input_hash: d5d664277c158311e886351e8bc2c395673c8d474109bf131ed783441dbcccd0
 
 channels:
   - conda-forge
@@ -79,7 +79,7 @@ dependencies:
   - xorg-libxdmcp=1.1.5=hb9d3cd8_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-win-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: 6edc8c2f6d302b4271667ea90878bf83a9f922e21ecfb73c480998517a49dec7
+# input_hash: 11bd7a316b2db9ce51c53a95c8c1b1059fd19fa8c274d81e850fb842a3115d6f
 
 channels:
   - conda-forge
@@ -23,7 +23,6 @@ dependencies:
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
-  - jinja2=3.1.6=pyhd8ed1ab_0
   - krb5=1.21.3=hdf4eb48_0
   - lcms2=2.17=hbcf6048_0
   - lerc=4.0.0=h6470a55_1
@@ -54,7 +53,6 @@ dependencies:
   - libxml2-16=2.15.1=h692994f_0
   - libzlib=1.3.1=h2466b09_2
   - llvm-openmp=21.1.4=hfa2b4ca_0
-  - markupsafe=3.0.3=py310hdb0e946_0
   - mccabe=0.7.0=pyhd8ed1ab_1
   - mkl=2025.3.0=hac47afa_454
   - numpy=1.26.4=py310hf667824_0
@@ -96,7 +94,7 @@ dependencies:
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hbeecb71_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-win-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: 6edc8c2f6d302b4271667ea90878bf83a9f922e21ecfb73c480998517a49dec7
+# input_hash: 11bd7a316b2db9ce51c53a95c8c1b1059fd19fa8c274d81e850fb842a3115d6f
 
 channels:
   - conda-forge
@@ -73,7 +73,7 @@ dependencies:
   - xorg-libxdmcp=1.1.5=h0e40799_0
   - zstd=1.5.7=hbeecb71_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.11-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 2467c021e67c6ed79cb5c2602cf372ee016ac4ab319342fc1c2b0d3f606586e9
+# input_hash: d5f4ce331d9bf1d4bdfaae538de99b1317abd1d0dc8ef41abf4c6782dfce9cb1
 
 channels:
   - conda-forge
@@ -25,7 +25,6 @@ dependencies:
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
-  - jinja2=3.1.6=pyhd8ed1ab_0
   - keyutils=1.6.3=hb9d3cd8_0
   - krb5=1.21.3=h659f571_0
   - lcms2=2.17=h717163a_0
@@ -64,7 +63,6 @@ dependencies:
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
   - libzlib=1.3.1=hb9d3cd8_2
-  - markupsafe=3.0.3=py311h3778330_0
   - mccabe=0.7.0=pyhd8ed1ab_1
   - ncurses=6.5=h2d0b736_3
   - numpy=1.26.4=py311h64a7726_0
@@ -102,7 +100,7 @@ dependencies:
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.11-linux-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 2467c021e67c6ed79cb5c2602cf372ee016ac4ab319342fc1c2b0d3f606586e9
+# input_hash: d5f4ce331d9bf1d4bdfaae538de99b1317abd1d0dc8ef41abf4c6782dfce9cb1
 
 channels:
   - conda-forge
@@ -79,7 +79,7 @@ dependencies:
   - xorg-libxdmcp=1.1.5=hb9d3cd8_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.11-win-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: a11d50f0f2ccc80642736d72d5cedd0262e46f9d0ce19283394d7bb8861b05e9
+# input_hash: 55da01f80f145f23e70c94beb4fb3e0faa4a65991ef708d8a3370963a0debd6e
 
 channels:
   - conda-forge
@@ -23,7 +23,6 @@ dependencies:
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
-  - jinja2=3.1.6=pyhd8ed1ab_0
   - krb5=1.21.3=hdf4eb48_0
   - lcms2=2.17=hbcf6048_0
   - lerc=4.0.0=h6470a55_1
@@ -54,7 +53,6 @@ dependencies:
   - libxml2-16=2.15.1=h692994f_0
   - libzlib=1.3.1=h2466b09_2
   - llvm-openmp=21.1.4=hfa2b4ca_0
-  - markupsafe=3.0.3=py311h3f79411_0
   - mccabe=0.7.0=pyhd8ed1ab_1
   - mkl=2025.3.0=hac47afa_454
   - numpy=1.26.4=py311h0b4df5a_0
@@ -96,7 +94,7 @@ dependencies:
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hbeecb71_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.11-win-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: a11d50f0f2ccc80642736d72d5cedd0262e46f9d0ce19283394d7bb8861b05e9
+# input_hash: 55da01f80f145f23e70c94beb4fb3e0faa4a65991ef708d8a3370963a0debd6e
 
 channels:
   - conda-forge
@@ -73,7 +73,7 @@ dependencies:
   - xorg-libxdmcp=1.1.5=h0e40799_0
   - zstd=1.5.7=hbeecb71_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.12-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: c037c60e4a5f0cf9a5e61ff2f264e541fe93097019fa23937727bee9560931f8
+# input_hash: 232e72b7e66679450345d2757c215e93eab358b6db9b1b14628495a77273fbd3
 
 channels:
   - conda-forge
@@ -25,7 +25,6 @@ dependencies:
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
-  - jinja2=3.1.6=pyhd8ed1ab_0
   - keyutils=1.6.3=hb9d3cd8_0
   - krb5=1.21.3=h659f571_0
   - lcms2=2.17=h717163a_0
@@ -64,7 +63,6 @@ dependencies:
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
   - libzlib=1.3.1=hb9d3cd8_2
-  - markupsafe=3.0.3=py312h8a5da7c_0
   - mccabe=0.7.0=pyhd8ed1ab_1
   - ncurses=6.5=h2d0b736_3
   - numpy=1.26.4=py312heda63a1_0
@@ -102,7 +100,7 @@ dependencies:
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
 
 variables:
   KMP_WARNINGS: 0