Merge pull request #345 from MiraGeoscience/GEOPY-2661

GEOPY-2661: Update minimum requirement to python >=3.12, <3.15 and numpy 2.*

Author: domfournier

.github/workflows/python_analysis.yml

@@ -33,7 +33,7 @@ jobs:
     with:
       package-manager: 'conda'
       app-name: 'simpeg_drivers'
-      python-version: '3.10'
+      python-version: '3.12'
   call-workflow-pytest:
     name: Pytest
     uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-pytest.yml@v2
@@ -42,10 +42,10 @@ jobs:
       pull-requests: read
     with:
       package-manager: 'conda'
-      python-versions: '["3.10", "3.11", "3.12"]'
+      python-versions: '["3.12", "3.13", "3.14"]'
       os: '["ubuntu-latest", "windows-latest"]'
       cache-number: 1
-      codecov-reference-python-version: '3.10'
+      codecov-reference-python-version: '3.12'
       codecov-reference-os: '["ubuntu-latest"]'
       timeout-minutes: 40
     secrets:

.github/workflows/python_deploy_dev.yml

@@ -19,7 +19,7 @@ jobs:
       contents: write
     with:
       package-name: 'simpeg-drivers'
-      python-version: '3.10'
+      python-version: '3.12'
       source-repo-names: '["public-noremote-conda-dev"]'
       conda-channels: '["conda-forge"]'
       publish-repo-names: '["public-noremote-conda-dev"]'
@@ -35,7 +35,7 @@ jobs:
       package-manager: 'poetry'
       package-name: 'simpeg-drivers'
       version-tag: ${{ github.ref_name }}
-      python-version: '3.10'
+      python-version: '3.12'
       virtual-repo-names: '["public-pypi-dev", "test-pypi"]'
     secrets:
       JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}

.pre-commit-config.yaml

@@ -35,7 +35,7 @@ repos:
 #    hooks:
 #    -   id: mypy
 #        additional_dependencies: [
-#            numpy==1.26.*,
+#            numpy==2.4.*,
 #            types-toml,
 #            types-PyYAML,
 #            tomli  # to read config from pyproject.toml

README.rst

@@ -52,7 +52,7 @@ Documentation
 
 Installation
 ^^^^^^^^^^^^
-**simpeg-drivers** is currently written for Python 3.10 or higher.
+**simpeg-drivers** is currently written for Python 3.12 or higher.
 
 Install Conda
 -------------

deps-lock-config.yaml

@@ -1,5 +1,5 @@
 include_dev: True
 py_versions:
-  - "3.10"
-  - "3.11"
   - "3.12"
+  - "3.13"
+  - "3.14"

docs/environment.yml

@@ -4,7 +4,7 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - python=3.10
+  - python=3.12
   - scipy
   - numpy
   - h5py

environments/env-python-3.10.yml environments/env-python-3.13.ymlenvironments/env-python-3.10.yml renamed to environments/env-python-3.13.yml

@@ -1,3 +1,3 @@
 dependencies:
-  - python=3.10.*
+  - python=3.13.*
   - pip

environments/env-python-3.11.yml environments/env-python-3.14.ymlenvironments/env-python-3.11.yml renamed to environments/env-python-3.14.yml

@@ -1,3 +1,3 @@
 dependencies:
-  - python=3.11.*
+  - python=3.14.*
   - pip

environments/py-3.12-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 8d2ec2f5bff152c0b1a90962f693656e4ddb9e44ed5c8117e1ca290243cc3f6e
+# input_hash: b650972838f330e6f6ff8085b1b9f2d62dc60aa14a8c4e08de2c9a72ca866d3c
 
 channels:
   - conda-forge
@@ -28,7 +28,7 @@ dependencies:
   - brotli=1.2.0=hed03a55_1
   - brotli-bin=1.2.0=hb03c661_1
   - brotli-python=1.2.0=py312hdb49522_1
-  - bzip2=1.0.8=hda65f42_8
+  - bzip2=1.0.8=hda65f42_9
   - c-ares=1.34.6=hb03c661_0
   - ca-certificates=2026.1.4=hbd8a1cb_0
   - cached-property=1.5.2=hd8ed1ab_1
@@ -51,7 +51,7 @@ dependencies:
   - defusedxml=0.7.1=pyhd8ed1ab_0
   - deprecated=1.3.1=pyhd8ed1ab_1
   - dill=0.4.1=pyhcf101f3_0
-  - discretize=0.11.3=py312hf890105_1
+  - discretize=0.12.0=np2py312h2a48985_1
   - distributed=2025.3.1=pyhd8ed1ab_0
   - docutils=0.18.1=py312h7900ff3_1
   - exceptiongroup=1.3.1=pyhd8ed1ab_0
@@ -61,7 +61,7 @@ dependencies:
   - fqdn=1.5.1=pyhd8ed1ab_1
   - freetype=2.14.1=ha770c72_0
   - fsspec=2026.2.0=pyhd8ed1ab_0
-  - geoana=0.7.2=py312hf890105_1
+  - geoana=0.8.1=np2py312h2a48985_0
   - h11=0.16.0=pyhcf101f3_1
   - h2=4.3.0=pyhcf101f3_0
   - h5py=3.15.1=nompi_py312ha4f8f14_101
@@ -95,10 +95,10 @@ dependencies:
   - jupyter-lsp=2.3.0=pyhcf101f3_0
   - jupyter_client=8.8.0=pyhcf101f3_0
   - jupyter_core=5.9.1=pyhc90fa1f_0
-  - jupyter_events=0.12.0=pyh29332c3_0
+  - jupyter_events=0.12.0=pyhe01879c_0
   - jupyter_server=2.17.0=pyhcf101f3_0
   - jupyter_server_terminals=0.5.4=pyhcf101f3_0
-  - jupyterlab=4.5.3=pyhd8ed1ab_0
+  - jupyterlab=4.5.4=pyhd8ed1ab_0
   - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2
   - jupyterlab_server=2.28.0=pyhcf101f3_0
   - jupyterlab_widgets=1.1.11=pyhd8ed1ab_0
@@ -111,39 +111,39 @@ dependencies:
   - ld_impl_linux-64=2.45.1=default_hbd61a6d_101
   - lerc=4.0.0=h0aef613_1
   - libaec=1.1.5=h088129d_0
-  - libblas=3.9.0=37_h5875eb1_mkl
+  - libblas=3.11.0=5_h5875eb1_mkl
   - libbrotlicommon=1.2.0=hb03c661_1
   - libbrotlidec=1.2.0=hb03c661_1
   - libbrotlienc=1.2.0=hb03c661_1
-  - libcblas=3.9.0=37_hfef963f_mkl
+  - libcblas=3.11.0=5_hfef963f_mkl
   - libcurl=8.18.0=h4e3cde8_0
   - libdeflate=1.25=h17f619e_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
-  - libexpat=2.7.3=hecca717_0
+  - libexpat=2.7.4=hecca717_0
   - libffi=3.5.2=h3435931_0
   - libfreetype=2.14.1=ha770c72_0
   - libfreetype6=2.14.1=h73754d4_0
-  - libgcc=15.2.0=he0feb66_17
-  - libgcc-ng=15.2.0=h69a702a_17
-  - libgfortran=15.2.0=h69a702a_17
-  - libgfortran5=15.2.0=h68bc16d_17
+  - libgcc=15.2.0=he0feb66_18
+  - libgcc-ng=15.2.0=h69a702a_18
+  - libgfortran=15.2.0=h69a702a_18
+  - libgfortran5=15.2.0=h68bc16d_18
   - libhwloc=2.12.2=default_hafda6a7_1000
   - libiconv=1.18=h3b78370_2
   - libjpeg-turbo=3.1.2=hb03c661_0
-  - liblapack=3.9.0=37_h5e43f62_mkl
+  - liblapack=3.11.0=5_h5e43f62_mkl
   - liblzma=5.8.2=hb03c661_0
   - libnghttp2=1.67.0=had1ee68_0
   - libnsl=2.0.1=hb9d3cd8_1
   - libpng=1.6.55=h421ea60_0
-  - libscotch=7.0.6=hea33c07_1
+  - libscotch=7.0.11=int32_h865694f_0
   - libsodium=1.0.20=h4ab18f5_0
-  - libspatialindex=2.0.0=he02047a_0
+  - libspatialindex=2.1.0=he57a185_0
   - libsqlite=3.51.2=h0c1763c_0
   - libssh2=1.11.1=hcf80075_0
-  - libstdcxx=15.2.0=h934c35e_17
-  - libstdcxx-ng=15.2.0=hdf11a46_17
+  - libstdcxx=15.2.0=h934c35e_18
+  - libstdcxx-ng=15.2.0=hdf11a46_18
   - libtiff=4.7.1=h9d88235_1
   - libuuid=2.41.3=h5347b49_0
   - libuv=1.51.0=hb03c661_1
@@ -157,17 +157,17 @@ dependencies:
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=4.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py312h8a5da7c_0
-  - matplotlib-base=3.8.4=py312h20ab3a6_2
+  - matplotlib-base=3.10.8=py312he3d6523_0
   - matplotlib-inline=0.2.1=pyhd8ed1ab_0
   - mccabe=0.7.0=pyhd8ed1ab_1
   - mdit-py-plugins=0.5.0=pyhd8ed1ab_0
   - mdurl=0.1.2=pyhd8ed1ab_1
   - metis=5.1.0=hd0bcaf9_1007
   - mistune=3.2.0=pyhcf101f3_0
-  - mkl=2024.2.2=ha770c72_17
+  - mkl=2025.3.0=h0e700b2_463
   - msgpack-python=1.1.2=py312hd9148b4_1
-  - mumps-include=5.7.3=h82cca05_10
-  - mumps-seq=5.7.3=h06cbf8f_10
+  - mumps-include=5.8.2=h1795ed4_1
+  - mumps-seq=5.8.2=h31f7764_1
   - munkres=1.1.4=pyhd8ed1ab_1
   - nbclient=0.10.4=pyhd8ed1ab_0
   - nbconvert=7.16.6=hc388f54_1
@@ -180,20 +180,20 @@ dependencies:
   - notebook=7.5.3=pyhcf101f3_0
   - notebook-shim=0.2.4=pyhd8ed1ab_1
   - numcodecs=0.15.1=py312hf79963d_1
-  - numpy=1.26.4=py312heda63a1_0
+  - numpy=2.4.2=py312h33ff503_1
   - openjpeg=2.5.4=h55fea9a_0
   - openssl=3.6.1=h35e630c_1
   - overrides=7.7.0=pyhd8ed1ab_1
   - packaging=26.0=pyhcf101f3_0
-  - pandas=3.0.0=py312h8ecdadd_0
+  - pandas=3.0.1=py312h8ecdadd_0
   - pandoc=3.9=ha770c72_0
   - pandocfilters=1.5.0=pyhd8ed1ab_0
   - parso=0.8.6=pyhcf101f3_0
   - partd=1.4.2=pyhd8ed1ab_0
   - pexpect=4.9.0=pyhd8ed1ab_1
-  - pillow=10.3.0=py312h287a98d_1
+  - pillow=12.1.1=py312h50c33e8_0
   - pip=26.0.1=pyh8b19718_0
-  - platformdirs=4.5.1=pyhcf101f3_0
+  - platformdirs=4.9.2=pyhcf101f3_0
   - pluggy=1.6.0=pyhf9edf01_1
   - prometheus_client=0.24.1=pyhd8ed1ab_0
   - prompt-toolkit=3.0.52=pyha770c72_0
@@ -204,7 +204,7 @@ dependencies:
   - pycparser=2.22=pyh29332c3_1
   - pydantic=2.12.5=pyhcf101f3_1
   - pydantic-core=2.41.5=py312h868fb18_1
-  - pydiso=0.1.2=py312h686354e_1
+  - pydiso=0.2.0=np2py312h1cfd70e_1
   - pygments=2.19.2=pyhd8ed1ab_0
   - pylint=4.0.4=pyhcf101f3_0
   - pymatsolver=0.3.1=pyh48887ae_201
@@ -217,12 +217,13 @@ dependencies:
   - python-fastjsonschema=2.21.2=pyhe01879c_0
   - python-gil=3.12.12=hd8ed1ab_2
   - python-json-logger=2.0.7=pyhd8ed1ab_0
-  - python-mumps=0.0.3=py312h6ad3ee3_0
+  - python-mumps=0.0.6=nompi_h4762de1
   - python-tzdata=2025.3=pyhd8ed1ab_0
   - python_abi=3.12=8_cp312
   - pytz=2025.2=pyhd8ed1ab_0
   - pyyaml=6.0.3=py312h8a5da7c_1
   - pyzmq=27.1.0=py312hfb55c3c_0
+  - qhull=2020.2=h434a139_5
   - readline=8.3=h853b02a_0
   - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1
   - referencing=0.37.0=pyhcf101f3_0
@@ -231,10 +232,10 @@ dependencies:
   - rfc3986-validator=0.1.1=pyh9f0ad1d_0
   - rfc3987-syntax=1.1.0=pyhe01879c_1
   - rpds-py=0.30.0=py312h868fb18_0
-  - rtree=1.2.0=py312h3ed4c40_1
-  - scikit-learn=1.6.1=py312h7a48858_0
-  - scipy=1.14.1=py312h62794b6_2
-  - send2trash=2.1.0=pyha191276_0
+  - rtree=1.4.1=pyh11ca60a_0
+  - scikit-learn=1.8.0=np2py312h3226591_1
+  - scipy=1.17.0=py312h54fa4ab_1
+  - send2trash=2.1.0=pyha191276_1
   - setuptools=82.0.0=pyh332efcf_0
   - six=1.17.0=pyhe01879c_1
   - sniffio=1.3.1=pyhd8ed1ab_2
@@ -249,7 +250,7 @@ dependencies:
   - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1
   - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1
   - stack_data=0.6.3=pyhd8ed1ab_1
-  - tbb=2021.13.0=hb700be7_5
+  - tbb=2022.3.0=hb700be7_2
   - tblib=3.2.2=pyhcf101f3_0
   - terminado=0.18.1=pyhc90fa1f_1
   - threadpoolctl=3.6.0=pyhecae5ae_0
@@ -259,15 +260,15 @@ dependencies:
   - tomlkit=0.14.0=pyha770c72_0
   - toolz=1.1.0=pyhd8ed1ab_1
   - tornado=6.5.3=py312h4c3975b_0
-  - tqdm=4.67.3=pyh8f84b5b_0
+  - tqdm=4.66.6=pyhd8ed1ab_0
   - traitlets=5.14.3=pyhd8ed1ab_1
   - trimesh=4.1.8=pyhd8ed1ab_0
   - typing-extensions=4.15.0=h396c80c_0
   - typing-inspection=0.4.2=pyhd8ed1ab_1
   - typing_extensions=4.15.0=pyhcf101f3_0
   - typing_utils=0.1.0=pyhd8ed1ab_1
   - tzdata=2025c=hc9c84f9_1
-  - unicodedata2=17.0.0=py312h4c3975b_1
+  - unicodedata2=17.0.1=py312h4c3975b_0
   - uri-template=1.3.0=pyhd8ed1ab_1
   - urllib3=2.6.3=pyhd8ed1ab_0
   - wcwidth=0.6.0=pyhd8ed1ab_0
@@ -286,11 +287,12 @@ dependencies:
   - zict=3.0.0=pyhd8ed1ab_1
   - zipp=3.23.0=pyhcf101f3_1
   - zlib=1.3.1=hb9d3cd8_2
+  - zlib-ng=2.3.3=hceb46e0_1
   - zstd=1.5.7=hb78ec9c_6
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@f38f025b418b3cc80f26f198084566fbf2f9711e
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@53fbc8c6620894ac37f52dfa210909a2fa472714
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@b453eb336ace73ced82149313b91eeff030371de
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@668a9e0da5214e4a3bce466321cd910f1bb00b02
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@9e0a86e5afadfe9c55e9811317827a4f6c2c70c4
+    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@5a6de92816acb737499a8e188eb5b97acb966f37
     - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@ef94a62a27ecf9713377801f6632861a07e2a65c
 
 variables: