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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 11# Evoked Response Detection
22A python package and docker application for the automatic detection of evoked responses in SPES/CCEP data
33
4- ## Docker Usage
5-
6- To launch an instance of the container and analyse data in BIDS format, in the command-line interface/terminal:
7-
8- ```
9- docker run multimodalneuro/erdetect <bids_dir>:/data <output_dir>:/output [--participant_label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]]
10- ```
11- For example, to run an analysis, type:
12-
13- ```
14- docker run -ti --rm \
15- -v /local_bids_data_root/:/data \
16- -v /local_output_path/:/output \
17- multimodalneuro/erdetect /data /output --participant_label 01
18- ```
19-
20-
214## Python Usage
225
2361 . First install ERdetect, in the command-line run:
@@ -42,6 +25,22 @@ import erdetect
4225erdetect.process_subset('/bids_data_root/subj-01/ieeg/sub-01_run-06.edf', '/output_path/')
4326```
4427
28+ ## Docker Usage
29+
30+ To launch an instance of the container and analyse data in BIDS format, in the command-line interface/terminal:
31+
32+ ```
33+ docker run multimodalneuro/erdetect <bids_dir>:/data <output_dir>:/output [--participant_label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]]
34+ ```
35+ For example, to run an analysis, type:
36+
37+ ```
38+ docker run -ti --rm \
39+ -v /local_bids_data_root/:/data \
40+ -v /local_output_path/:/output \
41+ multimodalneuro/erdetect /data /output --participant_label 01
42+ ```
43+
4544
4645
4746## Configure detection
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