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Commit bdb6f58

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fixed syntactic error referring to wrong table
1 parent 42949b0 commit bdb6f58

1 file changed

Lines changed: 1 addition & 20 deletions

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Analysis/affymetrix/garfield_import_dmet_twog.sql

Lines changed: 1 addition & 20 deletions
Original file line numberDiff line numberDiff line change
@@ -97,16 +97,14 @@ INSERT INTO garfield_node_assembly(node_id,node_name,ttype)
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SELECT DISTINCT 'n'||substring(target,5),target,ttype
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FROM garfield_dmet_begin;
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100-
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-- gen1_cited
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INSERT INTO garfield_node_assembly(node_id,node_name,ttype)
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SELECT DISTINCT 'n'||substring(source,5),source,stype
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FROM garfield_dmet_twog;
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INSERT INTO garfield_node_assembly(node_id,node_name,ttype)
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SELECT DISTINCT 'n'||substring(target,5),target,ttype
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FROM garfield_dmet_begin;
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FROM garfield_dmet_twog;
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CREATE INDEX garfield_node_assembly_idx ON garfield_node_assembly(node_id);
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DROP TABLE IF EXISTS garfield_nodelist;
@@ -160,23 +158,6 @@ CREATE TABLE garfield_nodelist_formatted_b_pmid AS
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SELECT a.*,b.pmid_int FROM garfield_nodelist_formatted_b a
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LEFT JOIN wos_pmid_mapping b ON a.node_name=b.wos_id;
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/*
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DROP TABLE IF EXISTS garfield_nodelist_formatted_b_pmid_grants;
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CREATE TABLE garfield_nodelist_formatted_b_pmid_grants AS
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SELECT a.*,b.project_number FROM garfield_nodelist_formatted_b_pmid a
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LEFT JOIN exporter_publink b ON a.pmid_int=b.pmid::int;
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ALTER TABLE garfield_nodelist_formatted_b_pmid_grants ADD COLUMN ic varchar(2);
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ALTER TABLE garfield_nodelist_formatted_b_pmid_grants ADD COLUMN nida varchar(10);
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ALTER TABLE garfield_nodelist_formatted_b_pmid_grants ADD COLUMN other_nih varchar(10);
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UPDATE garfield_nodelist_formatted_b_pmid_grants SET ic=substring(project_number,4,2);
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UPDATE garfield_nodelist_formatted_b_pmid_grants SET nida='1' WHERE ic='DA';
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UPDATE garfield_nodelist_formatted_b_pmid_grants SET nida='0' WHERE nida IS NULL;
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UPDATE garfield_nodelist_formatted_b_pmid_grants SET other_nih='1' WHERE ic IS NOT NULL AND nida='0';
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UPDATE garfield_nodelist_formatted_b_pmid_grants SET other_nih='0' WHERE other_nih IS NULL;
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*/
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DROP TABLE IF EXISTS garfield_nodelist_formatted_b_pmid_grants;
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CREATE TABLE garfield_nodelist_formatted_b_pmid_grants AS
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SELECT

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