feat: use MOSuite v0.3.0

Author: kelly-sovacool

.codeocean/app-panel.json

@@ -22,6 +22,7 @@
 		"capsule_mosuite_plot_3_d_pca_14",
 		"capsule_mosuite_plot_volcano_enhanced_15",
 		"capsule_mosuite_plot_volcano_summary_16",
-		"capsule_mosuite_plot_venn_diagram_17"
+		"capsule_mosuite_plot_venn_diagram_17",
+		"capsule_mosuite_write_multiomicdataset_properties_18"
 	]
 }

.codeocean/nextflow.json

@@ -4,11 +4,10 @@
 		{
 			"name": "capsule_mosuite_create_multiomicdataset_4",
 			"capsule": {
-				"id": "1d6bde8f-5f58-40b9-8133-6ea2156d5b02",
+				"id": "5ce5f88d-980d-4e61-b3a4-ef4a0ce48030",
 				"name": "MOSuite - create multiOmicDataSet",
-				"slug": "2543295",
-				"commit": "1da50426da33695c8f5a91ad5d21ff302fdf66db",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "6541445",
+				"version": 6,
 				"app_panel": true
 			},
 			"resources": {
@@ -29,11 +28,10 @@
 		{
 			"name": "capsule_mosuite_filter_low_counts_6",
 			"capsule": {
-				"id": "34ccaa24-827d-4ab1-a707-a3d7710abfa6",
+				"id": "0296f612-3498-4ed0-ac13-50620e45d67d",
 				"name": "MOSuite - filter low counts",
-				"slug": "2922767",
-				"commit": "aea9f61f096eb162ca05423b137268af30268ca6",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "4565215",
+				"version": 3,
 				"app_panel": true
 			},
 			"resources": {
@@ -48,16 +46,18 @@
 					"name": "MOSuite - clean raw counts",
 					"collect": true
 				}
-			]
+			],
+			"results": {
+				"id": "0296f612-3498-4ed0-ac13-50620e45d67d"
+			}
 		},
 		{
 			"name": "capsule_mosuite_normalize_counts_7",
 			"capsule": {
-				"id": "3ee00838-8eaa-414c-bfa9-c2f8e607b2ae",
+				"id": "75561d95-aa78-4140-b64d-ddae5b64fc39",
 				"name": "MOSuite - normalize counts",
-				"slug": "6680510",
-				"commit": "dc5748a4ca64d37a198ad6b3beab0cd767a9f27d",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "9169525",
+				"version": 3,
 				"app_panel": true
 			},
 			"resources": {
@@ -77,11 +77,10 @@
 		{
 			"name": "capsule_mosuite_clean_raw_counts_8",
 			"capsule": {
-				"id": "275d525b-a6f5-44d3-98d1-72a2b8fa9f3c",
+				"id": "ab07963e-d9e0-489e-b776-70f6ef2ef73b",
 				"name": "MOSuite - clean raw counts",
-				"slug": "9989765",
-				"commit": "00418ae8b9032d4ce46741b3a6da33a236896ffa",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "5801113",
+				"version": 4,
 				"app_panel": true
 			},
 			"resources": {
@@ -96,16 +95,18 @@
 					"name": "MOSuite - create multiOmicDataSet",
 					"collect": true
 				}
-			]
+			],
+			"results": {
+				"id": "ab07963e-d9e0-489e-b776-70f6ef2ef73b"
+			}
 		},
 		{
 			"name": "capsule_mosuite_batch_correct_counts_9",
 			"capsule": {
-				"id": "2eae5a71-36a6-44e2-a3b2-2cd5634b445d",
+				"id": "065804a2-efa7-43f2-9692-967bf0d6b592",
 				"name": "MOSuite - batch correct counts",
-				"slug": "8049145",
-				"commit": "20c082a76dfa497edbac1eabf3ca394190215fc0",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "1373453",
+				"version": 3,
 				"app_panel": true
 			},
 			"resources": {
@@ -127,11 +128,10 @@
 		{
 			"name": "capsule_mosuite_differential_expression_analysis_10",
 			"capsule": {
-				"id": "20681ac6-cb5c-4cb3-8b70-d2d35a4a57d3",
+				"id": "03afd79c-bd16-4767-ade0-794d2d6c88bc",
 				"name": "MOSuite - differential expression analysis",
-				"slug": "9971852",
-				"commit": "eb9bb8654c41454da9393efb39b075ee446db66c",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "6218465",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -151,11 +151,10 @@
 		{
 			"name": "capsule_mosuite_filter_differential_expression_results_11",
 			"capsule": {
-				"id": "1231d6b7-b591-4efa-a1b9-821425d54d8a",
+				"id": "7fffbb1b-6366-4787-987d-79decf782bf2",
 				"name": "MOSuite - filter differential expression",
-				"slug": "8221739",
-				"commit": "8e44d8929659bc82848a18a1edd5723a341cbf7f",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "5215013",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -170,19 +169,15 @@
 					"name": "MOSuite - differential expression analysis",
 					"collect": true
 				}
-			],
-			"results": {
-				"id": "7fffbb1b-6366-4787-987d-79decf782bf2"
-			}
+			]
 		},
 		{
 			"name": "capsule_mosuite_plot_expression_heatmap_12",
 			"capsule": {
-				"id": "b1c2220e-36e5-4592-a3a7-4a50ed5f9fca",
+				"id": "e9bb1415-3976-46d0-b978-2e8e3554ecd2",
 				"name": "MOSuite - plot expression heatmap",
-				"slug": "6385174",
-				"commit": "2184ab214d95e361b3db938e153684f99afadd83",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "0936928",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -205,11 +200,10 @@
 		{
 			"name": "capsule_mosuite_plot_2_d_pca_13",
 			"capsule": {
-				"id": "64e9c322-1a38-4e54-9bf6-965ca3b0c4c3",
+				"id": "74b4ec28-63bb-4007-a375-053c8d76260d",
 				"name": "MOSuite - plot 2D PCA",
-				"slug": "0166328",
-				"commit": "9c7198585b4bd6c2b01cbadbbd325ef4813d57fd",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "8095429",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -232,11 +226,10 @@
 		{
 			"name": "capsule_mosuite_plot_3_d_pca_14",
 			"capsule": {
-				"id": "a160b105-3084-46fc-8cc9-02886fd4bacb",
+				"id": "26158c6d-404a-48a6-8cc8-af079827c942",
 				"name": "MOSuite - plot 3D PCA",
-				"slug": "3838154",
-				"commit": "c7a904144f770af28bd08bae91e36ae2e3bf53fe",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "3313117",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -259,11 +252,10 @@
 		{
 			"name": "capsule_mosuite_plot_volcano_enhanced_15",
 			"capsule": {
-				"id": "1ed73516-2eb1-4bcf-919e-bb2f03664fb2",
+				"id": "4fbfaf69-b582-4533-8e00-f138caa869d1",
 				"name": "MOSuite - Plot Volcano Enhanced",
-				"slug": "0997557",
-				"commit": "b889f36e190d58e04371485ff9e6c9f495f94e6e",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "7581039",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -286,11 +278,10 @@
 		{
 			"name": "capsule_mosuite_plot_volcano_summary_16",
 			"capsule": {
-				"id": "49efd716-f3b6-4d75-a62a-0f61bed2e75b",
+				"id": "f47f9943-0628-44d3-ae81-b2ed11d73817",
 				"name": "MOSuite - Plot Volcano Summary",
-				"slug": "9325734",
-				"commit": "e4e95bddcae0b5849a6a27f8ba508ee59aa82e5c",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "6849617",
+				"version": 3,
 				"app_panel": true
 			},
 			"resources": {
@@ -313,11 +304,10 @@
 		{
 			"name": "capsule_mosuite_plot_venn_diagram_17",
 			"capsule": {
-				"id": "fc79457f-e98b-4446-af20-6a47ac21bfc4",
+				"id": "b18a7c9b-d66b-4921-9df8-0cfa88a4a35a",
 				"name": "MOSuite - Plot Venn Diagram",
-				"slug": "0361730",
-				"commit": "8bc11db1cc07323ad04c8e6559b49c43390d3fa7",
-				"image_tag": "48e7c7a2092005352c3de6bb27945664",
+				"slug": "5013652",
+				"version": 2,
 				"app_panel": true
 			},
 			"resources": {
@@ -336,6 +326,32 @@
 			"results": {
 				"id": "b18a7c9b-d66b-4921-9df8-0cfa88a4a35a"
 			}
+		},
+		{
+			"name": "capsule_mosuite_write_multiomicdataset_properties_18",
+			"capsule": {
+				"id": "b34c433c-950b-4860-9f43-e424babf0f2d",
+				"name": "MOSuite - write multiOmicDataSet properties",
+				"slug": "1548591",
+				"version": 1,
+				"app_panel": true
+			},
+			"resources": {
+				"cpus": 1,
+				"memory": 8
+			},
+			"inputs": [
+				{
+					"id": "l2BHyn5ALz0N0J9X",
+					"source_id": "capsule_mosuite_filter_differential_expression_results_11",
+					"type": "capsule",
+					"name": "MOSuite - filter differential expression",
+					"collect": true
+				}
+			],
+			"results": {
+				"id": "ece1b077-cfff-419b-9f88-76f268f01cff"
+			}
 		}
 	]
 }