implemented electrode extraction from metadata and added kCSD plot

Author: danek8317

figures/npx/DemoReadSGLXData/readSGLX.py

@@ -64,7 +64,7 @@ def SampRate(meta):
 
 
 # Return a multiplicative factor for converting 16-bit file data
-# to volatge. This does not take gain into account. The full
+# to voltage. This does not take gain into account. The full
 # conversion with gain is:
 #         dataVolts = dataInt * fI2V / gain
 # Note that each channel may have its own gain.

figures/npx/map_npx_ele.py

@@ -71,8 +71,11 @@ def fetch_channels(eles):
 
 
 # File with the data
+# old
 # binFullPath = Path('./data/08_refGND_APx500_LFPx125_ApfiltON_corr_banks_stim50V_g0_t0.imec0.lf.bin')
+# Daniel
 binFullPath = Path('/mnt/zasoby/data/neuropixel/Neuropixel data from Ewa Kublik/SOV_12/data/08_refGND_APx500_LFPx125_ApfiltON_corr_banks_stim50V_g0_t0.imec0.lf.bin')
+# Chaitanya
 # binFullPath = Path('/home/chaitanya/LFP/SOV_12/data/08_refGND_APx500_LFPx125_ApfiltON_corr_banks_stim50V_g0_t0.imec0.lf.bin')
 
 tStart = 0        # in seconds