Fix JB2 in CI

Author: zmoon

.github/workflows/deploy.yml

@@ -19,22 +19,30 @@ jobs:
     environment:
       name: github-pages
       url: ${{ steps.deployment.outputs.page_url }}
+    defaults:
+      run:
+        shell: bash -leo pipefail {0}
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v5
 
       - name: Set up Pages
         uses: actions/configure-pages@v5
 
-      - name: Set up Python
+      - name: Set up conda env
         uses: mamba-org/setup-micromamba@v2
         with:
           environment-file: environment.yml
           cache-environment: true
 
+      - name: Install JB2
+        run: python -m pip install -U --pre "jupyter-book==2.*" --no-deps -v
+
+      - name: Execute the notebook
+        run: jupyter nbconvert --to notebook --execute --inplace 03-viz.ipynb
+
       - name: Build HTML
-        run: jupyter-book build --html --execute --strict --ci
-        shell: micromamba-shell {0}
+        run: jupyter book build --html --strict --ci
 
       - name: Upload artifact
         uses: actions/upload-pages-artifact@v4

03-viz.ipynb

@@ -15,6 +15,8 @@
     "title: Viz\n",
     "subtitle: Visualizing native-grid output in Python\n",
     "label: page:viz\n",
+    "kernelspec:\n",
+    "  name: python3\n",
     "---"
    ]
   },
@@ -742,28 +744,28 @@
    },
    "outputs": [],
    "source": [
-    "from lonboard import Map, PolygonLayer\n",
-    "from matplotlib.colors import Normalize\n",
-    "\n",
-    "gdf = (\n",
-    "    uxds[\"areaCell\"]\n",
-    "    .to_geodataframe(engine=\"geopandas\", periodic_elements=\"exclude\")\n",
-    "    .set_crs(\"EPSG:4326\")\n",
-    ")\n",
-    "\n",
-    "arr = gdf.areaCell\n",
-    "cmap = plt.get_cmap(\"gnuplot_r\")\n",
-    "norm = Normalize(vmin=arr.min(), vmax=arr.max())\n",
-    "colors = (cmap(norm(arr)) * 255).astype(\"uint8\")\n",
-    "\n",
-    "layer = PolygonLayer.from_geopandas(\n",
-    "    gdf,\n",
-    "    get_fill_color=colors,\n",
-    "    get_line_color=[0, 100, 100, 150],\n",
-    "    line_width_min_pixels=1,\n",
-    ")\n",
-    "m = Map(layer)\n",
-    "m"
+    "# from lonboard import Map, PolygonLayer\n",
+    "# from matplotlib.colors import Normalize\n",
+    "\n",
+    "# gdf = (\n",
+    "#     uxds[\"areaCell\"]\n",
+    "#     .to_geodataframe(engine=\"geopandas\", periodic_elements=\"exclude\")\n",
+    "#     .set_crs(\"EPSG:4326\")\n",
+    "# )\n",
+    "\n",
+    "# arr = gdf.areaCell\n",
+    "# cmap = plt.get_cmap(\"gnuplot_r\")\n",
+    "# norm = Normalize(vmin=arr.min(), vmax=arr.max())\n",
+    "# colors = (cmap(norm(arr)) * 255).astype(\"uint8\")\n",
+    "\n",
+    "# layer = PolygonLayer.from_geopandas(\n",
+    "#     gdf,\n",
+    "#     get_fill_color=colors,\n",
+    "#     get_line_color=[0, 100, 100, 150],\n",
+    "#     line_width_min_pixels=1,\n",
+    "# )\n",
+    "# m = Map(layer)\n",
+    "# m"
    ]
   }
  ],