Deploying to gh-pages from @ 7fda72c 🚀

Author: alex-omophub

LICENSE.html

@@ -10,7 +10,7 @@
 ## Citation
 
 Source:
-[`DESCRIPTION`](https://github.com/omopHub/omophub-R/blob/v1.4.0/DESCRIPTION)
+[`DESCRIPTION`](https://github.com/omopHub/omophub-R/blob/main/DESCRIPTION)
 
 Chen A (2026). *omophub: R Client for the 'OMOPHub' Medical Vocabulary
 API*. R package version 1.4.0, <https://github.com/omopHub/omophub-R>.

articles/getting-started.html

@@ -120,6 +120,29 @@ for (s in similar$similar_concepts) {
 }
 ```
 
+### Bulk Search
+
+Search for multiple terms in a single API call:
+
+``` r
+# Bulk lexical search (up to 50 queries)
+results <- client$search$bulk_basic(list(
+  list(search_id = "q1", query = "diabetes mellitus"),
+  list(search_id = "q2", query = "hypertension"),
+  list(search_id = "q3", query = "aspirin")
+), defaults = list(vocabulary_ids = list("SNOMED"), page_size = 5))
+
+for (item in results$results) {
+  cat(sprintf("%s: %d results\n", item$search_id, length(item$results)))
+}
+
+# Bulk semantic search (up to 25 queries)
+results <- client$search$bulk_semantic(list(
+  list(search_id = "s1", query = "heart failure treatment options"),
+  list(search_id = "s2", query = "type 2 diabetes medication")
+), defaults = list(threshold = 0.5, page_size = 10))
+```
+
 ## Use Cases
 
 ### ETL & Data Pipelines
@@ -207,7 +230,7 @@ concepts_df %>%
 | Resource       | Description                         | Key Methods                                                                                            |
 |----------------|-------------------------------------|--------------------------------------------------------------------------------------------------------|
 | `concepts`     | Concept lookup and batch operations | [`get()`](https://rdrr.io/r/base/get.html), `get_by_code()`, `batch()`, `suggest()`                    |
-| `search`       | Full-text and semantic search       | `basic()`, `advanced()`, `semantic()`, `semantic_all()`, `similar()`, `basic_all()`                    |
+| `search`       | Full-text and semantic search       | `basic()`, `advanced()`, `semantic()`, `similar()`, `bulk_basic()`, `bulk_semantic()`                  |
 | `hierarchy`    | Navigate concept relationships      | `ancestors()`, `descendants()`                                                                         |
 | `mappings`     | Cross-vocabulary mappings           | [`get()`](https://rdrr.io/r/base/get.html), [`map()`](https://purrr.tidyverse.org/reference/map.html)  |
 | `vocabularies` | Vocabulary metadata                 | [`list()`](https://rdrr.io/r/base/list.html), [`get()`](https://rdrr.io/r/base/get.html), `stats()`    |

authors.html

@@ -120,6 +120,29 @@ for (s in similar$similar_concepts) {
 }
 ```
 
+### Bulk Search
+
+Search for multiple terms in a single API call:
+
+``` r
+# Bulk lexical search (up to 50 queries)
+results <- client$search$bulk_basic(list(
+  list(search_id = "q1", query = "diabetes mellitus"),
+  list(search_id = "q2", query = "hypertension"),
+  list(search_id = "q3", query = "aspirin")
+), defaults = list(vocabulary_ids = list("SNOMED"), page_size = 5))
+
+for (item in results$results) {
+  cat(sprintf("%s: %d results\n", item$search_id, length(item$results)))
+}
+
+# Bulk semantic search (up to 25 queries)
+results <- client$search$bulk_semantic(list(
+  list(search_id = "s1", query = "heart failure treatment options"),
+  list(search_id = "s2", query = "type 2 diabetes medication")
+), defaults = list(threshold = 0.5, page_size = 10))
+```
+
 ## Use Cases
 
 ### ETL & Data Pipelines
@@ -207,7 +230,7 @@ concepts_df %>%
 | Resource       | Description                         | Key Methods                                                                                            |
 |----------------|-------------------------------------|--------------------------------------------------------------------------------------------------------|
 | `concepts`     | Concept lookup and batch operations | [`get()`](https://rdrr.io/r/base/get.html), `get_by_code()`, `batch()`, `suggest()`                    |
-| `search`       | Full-text and semantic search       | `basic()`, `advanced()`, `semantic()`, `semantic_all()`, `similar()`, `basic_all()`                    |
+| `search`       | Full-text and semantic search       | `basic()`, `advanced()`, `semantic()`, `similar()`, `bulk_basic()`, `bulk_semantic()`                  |
 | `hierarchy`    | Navigate concept relationships      | `ancestors()`, `descendants()`                                                                         |
 | `mappings`     | Cross-vocabulary mappings           | [`get()`](https://rdrr.io/r/base/get.html), [`map()`](https://purrr.tidyverse.org/reference/map.html)  |
 | `vocabularies` | Vocabulary metadata                 | [`list()`](https://rdrr.io/r/base/list.html), [`get()`](https://rdrr.io/r/base/get.html), `stats()`    |

authors.md

@@ -2,6 +2,8 @@
 
 ## omophub 1.4.0
 
+CRAN release: 2026-02-23
+
 ### New Features
 
 - **Semantic search** (`semantic()`, `semantic_all()`): Natural language

index.html

@@ -3,7 +3,7 @@ pkgdown: 2.2.0
 pkgdown_sha: ~
 articles:
   getting-started: getting-started.html
-last_built: 2026-02-23T08:54Z
+last_built: 2026-03-26T17:43Z
 urls:
   reference: https://omophub.github.io/omophub-R/reference
   article: https://omophub.github.io/omophub-R/articles