Formatting tweak. [ci skip]

Author: lohedges

examples/README.md

@@ -103,14 +103,14 @@ When running the above command, you should see output similar to the following:
 2025-09-22 15:38:45.754 | DEBUG    | ghostly._ghostly:modify:192 -   ghosts: [25]
 2025-09-22 15:38:45.754 | DEBUG    | ghostly._ghostly:modify:195 -   physical: [22,26,27]
 2025-09-22 15:38:45.754 | DEBUG    | ghostly._ghostly:modify:198 -   type: 3
-2025-09-22 15:38:45.754 | DEBUG    | ghostly._ghostly:_terminal:327 - Applying Boresch modifications to terminal ghost junction at λ = 0:
+2025-09-22 15:38:45.754 | DEBUG    | ghostly._ghostly:_terminal:327 - Applying modifications to terminal ghost junction at λ = 0:
 2025-09-22 15:38:45.756 | DEBUG    | ghostly._ghostly:_terminal:375 -   Removing dihedral: [29-27-30-35], 0.155556 cos(3 phi) + 0.155556
 2025-09-22 15:38:45.756 | DEBUG    | ghostly._ghostly:_terminal:375 -   Removing dihedral: [29-27-30-36], 0.155556 cos(3 phi) + 0.155556
 2025-09-22 15:38:45.756 | DEBUG    | ghostly._ghostly:_terminal:375 -   Removing dihedral: [29-27-30-37], 0.155556 cos(3 phi) + 0.155556
 2025-09-22 15:38:45.756 | DEBUG    | ghostly._ghostly:_terminal:375 -   Removing dihedral: [28-27-30-35], 0.155556 cos(3 phi) + 0.155556
 2025-09-22 15:38:45.756 | DEBUG    | ghostly._ghostly:_terminal:375 -   Removing dihedral: [28-27-30-36], 0.155556 cos(3 phi) + 0.155556
 2025-09-22 15:38:45.756 | DEBUG    | ghostly._ghostly:_terminal:375 -   Removing dihedral: [28-27-30-37], 0.155556 cos(3 phi) + 0.155556
-2025-09-22 15:38:45.757 | DEBUG    | ghostly._ghostly:_triple:666 - Applying Boresch modifications to triple ghost junction at λ = 1:
+2025-09-22 15:38:45.757 | DEBUG    | ghostly._ghostly:_triple:666 - Applying modifications to triple ghost junction at λ = 1:
 2025-09-22 15:38:45.757 | DEBUG    | ghostly._ghostly:_triple:787 -   Non-planar junction.
 2025-09-22 15:38:45.758 | DEBUG    | ghostly._ghostly:_triple:835 -   Softening angle: [22-24-25], 46.9 [theta - 1.8984]^2 --> 0.05 [theta - 1.8984]^2
 2025-09-22 15:38:45.758 | DEBUG    | ghostly._ghostly:_triple:835 -   Softening angle: [25-24-26], 39.4 [theta - 1.87763]^2 --> 0.05 [theta - 1.87763]^2

src/ghostly/_ghostly.py

@@ -46,7 +46,7 @@
 
 def modify(system, k_hard=100, k_soft=5, optimise_angles=True, num_optimise=10):
     """
-    Apply Boresch modifications to ghost atom bonded terms to avoid non-physical
+    Apply modifications to ghost atom bonded terms to avoid non-physical
     coupling between the ghost atoms and the physical region.
 
     Parameters
@@ -286,7 +286,7 @@ def modify(system, k_hard=100, k_soft=5, optimise_angles=True, num_optimise=10):
 
 def _terminal(mol, bridge, ghosts, physical, is_lambda1=False):
     r"""
-    Apply Boresch modifications to a terminal junction.
+    Apply modifications to a terminal junction.
 
     An example terminal junction with three ghost branches. Here X is the
     physical bridge atom.
@@ -325,7 +325,7 @@ def _terminal(mol, bridge, ghosts, physical, is_lambda1=False):
     """
 
     _logger.debug(
-        f"Applying Boresch modifications to terminal ghost junction at "
+        f"Applying modifications to terminal ghost junction at "
         f"{_lam_sym} = {int(is_lambda1)}:"
     )
 
@@ -387,7 +387,7 @@ def _terminal(mol, bridge, ghosts, physical, is_lambda1=False):
 
 def _dual(mol, bridge, ghosts, physical, k_hard=100, is_lambda1=False):
     r"""
-    Apply Boresch modifications to a dual junction.
+    Apply modifications to a dual junction.
 
     An example dual junction with two ghost branches. Here X is the physical
     bridge atom.
@@ -430,7 +430,7 @@ def _dual(mol, bridge, ghosts, physical, k_hard=100, is_lambda1=False):
     """
 
     _logger.debug(
-        f"Applying Boresch modifications to dual ghost junction at "
+        f"Applying modifications to dual ghost junction at "
         f"{_lam_sym} = {int(is_lambda1)}:"
     )
 
@@ -610,7 +610,7 @@ def _triple(
     is_lambda1=False,
 ):
     r"""
-    Apply Boresch modifications to a triple junction.
+    Apply modifications to a triple junction.
 
     An example triple junction. Here X is the physical bridge atom.
 
@@ -664,7 +664,7 @@ def _triple(
     """
 
     _logger.debug(
-        f"Applying Boresch modifications to triple ghost junction at "
+        f"Applying modifications to triple ghost junction at "
         f"{_lam_sym} = {int(is_lambda1)}:"
     )
 
@@ -986,7 +986,7 @@ def _higher(
     is_lambda1=False,
 ):
     r"""
-    Apply Boresch modifications to higher order junctions.
+    Apply modifications to higher order junctions.
 
     Parameters
     ----------
@@ -1030,7 +1030,7 @@ def _higher(
     """
 
     _logger.debug(
-        f"Applying Boresch modifications to higher order junction at "
+        f"Applying modifications to higher order junction at "
         f"{_lam_sym} = {int(is_lambda1)}:"
     )