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Jose Ramos-Mendez
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 Increased logo size New menu About Cleaning of index new file: about.html modified: assets/site.js modified: assets/styles.css modified: collaborators.html modified: contact.html modified: documentation.html modified: download.html modified: index.html modified: news.html modified: publications.html
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‎about.html‎

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<!doctype html>
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<html lang="en">
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<head>
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<meta charset="utf-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1" />
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<title>About | Open TOPAS</title>
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<link rel="stylesheet" href="assets/styles.css" />
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</head>
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<body>
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<header>
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<div class="navbar">
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<h1>
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<a class="logo-mark" href="index.html" aria-label="Open TOPAS home">
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<img src="assets/img/Logo.png" alt="" />
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</a>
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</h1>
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<button class="menu-toggle" type="button" aria-label="Toggle navigation" aria-expanded="false">
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<span></span>
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<span></span>
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<span></span>
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</button>
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<nav id="primary-nav" class="nav-links" aria-label="Main navigation">
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<a href="about.html" aria-current="page">About</a>
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<a href="download.html">Download</a>
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<a href="documentation.html">Documentation</a>
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<a href="news.html">News</a>
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<a href="publications.html">Publications</a>
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<a href="contact.html">Contact</a>
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</nav>
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</div>
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</header>
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<main>
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<section class="content-placeholder" aria-labelledby="about-overview">
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<div class="section-inner">
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<h2 id="about-overview">What is OpenTOPAS?</h2>
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<div class="text-columns">
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<p>
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The NIH-funded TOPAS project made radiation therapy simulations using the Monte Carlo method easily
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accessible for the radiotherapy community. This repository brings the code to a new, truly open
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release stage called <strong>OpenTOPAS</strong>.
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</p>
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<p>
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OpenTOPAS wraps and extends the <a href="https://geant4.web.cern.ch" target="_blank" rel="noopener">Geant4 Simulation Toolkit</a>
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to provide an easier-to-use application for the medical physicist. The parameter control system lets physicists assemble and control a rich
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library of simulation objects—geometry components, particle sources, scorers—without writing C++ or knowing Geant4 internals.
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Visit the <a href="https://opentopas.readthedocs.io/en/latest" target="_blank" rel="noopener">User Guide</a> for deeper dives.
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</p>
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<p>
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The project was originally created out of an NIH-funded collaboration of Massachusetts General Hospital,
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University of California San Francisco, and SLAC National Accelerator Laboratory. Today, the UCSF and MGH teams continue
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to maintain and expand OpenTOPAS in partnership with the Monte Carlo community.
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</p>
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<p>
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OpenTOPAS supports simulation of medical applications of ionizing radiation with the Monte Carlo method.
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Free availability is intended to aid research by medical physicists, radiobiologists, and clinicians across all radiotherapy modalities.
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New users should review the key publications to explore its potential.
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</p>
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</div>
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<div class="stat-grid">
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<article class="stat-card">
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<h3>Mission</h3>
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<p>
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Deliver a validated, community-supported Monte Carlo framework that enables accurate and efficient radiation therapy research.
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</p>
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</article>
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<article class="stat-card">
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<h3>Why Open</h3>
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<p>
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Full open access allows advanced users to extend the platform in C++ while benefiting from the OpenTOPAS parameter system and Geant4 flexibility.
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</p>
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</article>
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<article class="stat-card">
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<h3>Focus Areas</h3>
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<p>
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Proton and conventional radiotherapy, LET / RBE modelling, optical photon transport, dosimetry detectors, and radiopharmaceutical therapy.
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</p>
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</article>
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</div>
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</div>
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</section>
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<section class="section-inner" style="padding:4rem 1.5rem 3rem;">
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<h2>Collaborators</h2>
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<p>
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OpenTOPAS is jointly maintained by interdisciplinary teams at the University of California San Francisco and
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Massachusetts General Hospital / Harvard Medical School. Each site contributes physics leadership, code
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development, validation, and user support.
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</p>
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<div class="collab-grid">
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<article class="collab-card">
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<div>
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<img class="collab-logo" src="assets/img/UCSF_logo.png" alt="University of California San Francisco logo" />
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<h3>University of California San Francisco</h3>
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<p class="collab-role">Core Maintainers</p>
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<ul>
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<li>Bruce Faddegon (PI 2018-2024)</li>
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<li>José Ramos-Méndez</li>
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<li>Thongchai Masilela</li>
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<li>Naoki D-Kondo</li>
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<li>Ramon Ortiz</li>
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</ul>
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</div>
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</article>
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<article class="collab-card">
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<div>
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<img class="collab-logo" src="assets/img/MGH-Harvard_logo.png" alt="Massachusetts General Hospital Harvard Medical School logo" />
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<h3>Massachusetts General Hospital<br />Harvard Medical School</h3>
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<p class="collab-role">Core Maintainers</p>
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<ul>
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<li>Harald Paganetti (PI 2009-2016)</li>
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<li>Jan Schuemann</li>
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<li>Alejandro Bertolet</li>
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<li>Victor V. Onecha</li>
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<li>Wook-Geun Shin</li>
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</ul>
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</div>
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</article>
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</div>
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<div class="collab-grid former-grid">
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<article class="collab-card">
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<div>
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<h3>Former Contributors · UCSF</h3>
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<ul class="compact-list">
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<li>Daren Sawkey</li>
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<li>Jhonatan Carrasco Hernandez</li>
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<li>Jungwook Shin</li>
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<li>Kyungdon Choi</li>
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<li>Lucas Burigo</li>
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<li>Pierluigi Piersimoni</li>
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</ul>
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</div>
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</article>
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<article class="collab-card">
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<div>
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<h3>Former Contributors · MGH / Harvard</h3>
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<ul class="compact-list">
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<li>Aimee McNamara</li>
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<li>Alejandro Carabe-Fernández</li>
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<li>Andrea Attili</li>
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<li>David Hall</li>
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<li>David J Carlson</li>
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<li>Giulia Tamborino</li>
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<li>Hongyu Zhu</li>
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<li>Hoyeon Lee</li>
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<li>Hsiao-Ming Lu</li>
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<li>Ilaria Rinaldi</li>
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<li>Isaac Meyer</li>
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<li>Jungwook Shin</li>
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<li>Kira Grogg</li>
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<li>Lisa Polster</li>
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<li>Mauro Testa</li>
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<li>Nils Peters</li>
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<li>Robert Stewart</li>
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<li>Wonmo Sung</li>
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<li>Yizheng Chen</li>
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</ul>
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</div>
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</article>
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</div>
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</section>
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</main>
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<footer>
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<small>© <span id="year"></span> Open TOPAS · MIT License</small>
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</footer>
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<script src="assets/site.js"></script>
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</body>
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</html>

‎assets/site.js‎

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const nav = document.querySelector('.nav-links');
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const toggle = document.querySelector('.menu-toggle');
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if (nav) {
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const navItems = [
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{ href: 'about.html', label: 'About' },
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{ href: 'download.html', label: 'Download' },
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{ href: 'documentation.html', label: 'Documentation' },
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{ href: 'news.html', label: 'News' },
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{ href: 'publications.html', label: 'Publications' },
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{ href: 'contact.html', label: 'Contact' },
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];
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const currentPath = window.location.pathname.split('/').pop() || 'index.html';
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nav.innerHTML = navItems
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.map(({ href, label }) => {
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const isActive = currentPath === href;
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const activeAttr = isActive ? ' aria-current="page"' : '';
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return `<a href="${href}"${activeAttr}>${label}</a>`;
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})
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.join('');
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}
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if (nav && toggle) {
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toggle.addEventListener('click', () => {
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const open = nav.classList.toggle('open');

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