Update CI and dates in copyright headers (#172)

* Update Pipfile.lock

* Update date in copyright header

* Update Travis and Danger

* Use pipenv run to access YAPF

* Move to Python3 only in CI

Author: robertodr

.ci/Dangerfile

@@ -24,7 +24,7 @@ code_style_validation.check file_extensions: ['.hpp', '.cpp', '.h'],
                             ignore_file_patterns: [/^external\//]
 
 # Check code style with YAPF
-code_style_validation.check validator: 'yapf',
+code_style_validation.check validator: 'pipenv run yapf',
                             file_extensions: ['.py'],
                             ignore_file_patterns: [/^external\//]
 

.ci/Gemfile

@@ -4,4 +4,4 @@ source "https://rubygems.org"
 gem "danger"
 gem "danger-commit_lint"
 gem "danger-lgtm"
-gem 'danger-code_style_validation', '0.3.0' , :git => 'https://github.com/flix-tech/danger-code_style_validation.git'
+gem "danger-code_style_validation", :git => "https://github.com/flix-tech/danger-code_style_validation.git"

.ci/Gemfile.lock

@@ -18,52 +18,52 @@ GEM
     colored2 (3.1.2)
     cork (0.3.0)
       colored2 (~> 3.1)
-    danger (5.5.10)
+    danger (5.11.1)
       claide (~> 1.0)
       claide-plugins (>= 0.9.2)
       colored2 (~> 3.1)
       cork (~> 0.1)
       faraday (~> 0.9)
       faraday-http-cache (~> 1.0)
-      git (~> 1)
+      git (~> 1.5)
       kramdown (~> 1.5)
       no_proxy_fix
       octokit (~> 4.7)
       terminal-table (~> 1)
     danger-commit_lint (0.0.6)
       danger (~> 5.0)
-    danger-lgtm (1.0.0)
+    danger-lgtm (1.0.4)
       danger-plugin-api (~> 1.0)
     danger-plugin-api (1.0.0)
       danger (> 2.0)
-    faraday (0.14.0)
+    faraday (0.15.4)
       multipart-post (>= 1.2, < 3)
     faraday-http-cache (1.3.1)
       faraday (~> 0.8)
-    git (1.3.0)
-    kramdown (1.16.2)
+    git (1.5.0)
+    kramdown (1.17.0)
     multipart-post (2.0.0)
     nap (1.1.0)
     no_proxy_fix (0.1.2)
-    octokit (4.8.0)
+    octokit (4.13.0)
       sawyer (~> 0.8.0, >= 0.5.3)
     open4 (1.3.4)
-    public_suffix (3.0.2)
+    public_suffix (3.0.3)
     sawyer (0.8.1)
       addressable (>= 2.3.5, < 2.6)
       faraday (~> 0.8, < 1.0)
     terminal-table (1.8.0)
       unicode-display_width (~> 1.1, >= 1.1.1)
-    unicode-display_width (1.3.0)
+    unicode-display_width (1.4.1)
 
 PLATFORMS
   ruby
 
 DEPENDENCIES
   danger
-  danger-code_style_validation (= 0.3.0)!
+  danger-code_style_validation!
   danger-commit_lint
   danger-lgtm
 
 BUNDLED WITH
-   1.14.6
+   1.17.2

.travis.yml

@@ -1,6 +1,6 @@
 language: cpp
 sudo: false
-dist: trusty
+dist: xenial
 ruby: 2.2.0
 notifications:
   slack:
@@ -26,84 +26,79 @@ matrix:
       addons:
         apt:
           packages:
-            - cmake3
-            - cmake3-data
             - clang
             - clang-format-3.9
             - gfortran
             - libboost-math-dev
+            - python3
+            - python3-pip
       env:
         - CXX_COMPILER='clang++'
         - C_COMPILER='clang'
         - Fortran_COMPILER='gfortran'
         - BUILD_TYPE='release'
-        - PYTHON='--three'
         - RUN_DANGER=true
     - os: linux
       addons:
         apt:
           packages:
-            - cmake3
-            - cmake3-data
-            - g++
-            - gcc
-            - gfortran
+            - g++-4.8
+            - gcc-4.8
+            - gfortran-4.8
             - libboost-math-dev
+            - python3
+            - python3-pip
       env:
-        - CXX_COMPILER='g++'
-        - C_COMPILER='gcc'
-        - Fortran_COMPILER='gfortran'
+        - CXX_COMPILER='g++-4.8'
+        - C_COMPILER='gcc-4.8'
+        - Fortran_COMPILER='gfortran-4.8'
         - BUILD_TYPE='release'
-        - PYTHON='--two'
         - RUN_DANGER=false
     - os: linux
       addons:
         apt:
           sources:
             - ubuntu-toolchain-r-test
           packages:
-            - cmake3
-            - cmake3-data
             - g++-6
             - gcc-6
             - gfortran-6
             - libboost-math-dev
+            - python3
+            - python3-pip
       env:
         - CXX_COMPILER='g++-6'
         - C_COMPILER='gcc-6'
         - Fortran_COMPILER='gfortran-6'
         - BUILD_TYPE='release'
-        - PYTHON='--two'
         - STATIC='--static'
         - RUN_DANGER=false
     - os: linux
       addons:
         apt:
           packages:
-            - cmake3
-            - cmake3-data
             - g++
             - gcc
             - gfortran
             - libboost-math-dev
             - lcov
+            - python3
+            - python3-pip
       env:
         - CXX_COMPILER='g++'
         - C_COMPILER='gcc'
         - Fortran_COMPILER='gfortran'
         - BUILD_TYPE='debug'
-        - PYTHON='--two'
         - COVERAGE='--coverage'
         - RUN_DANGER=false
 before_install:
   - test -n $CC && unset CC
   - test -n $CXX && unset CXX
   - test -n $FC && unset FC
 install:
-  - pip install --user pipenv --upgrade
-  - pipenv $PYTHON install
+  - pip3 install --user pipenv --upgrade
+  - pipenv --python $(type -P python3) install --dev
 before_script:
-  - source $(pipenv --venv)/bin/activate
   - ./.ci/report_versions.sh
   - cd $TRAVIS_BUILD_DIR
   - echo 'Build set up summary'
@@ -117,7 +112,7 @@ script:
       BUNDLE_GEMFILE=.ci/Gemfile bundle exec danger --dangerfile=.ci/Dangerfile --verbose
     fi
   - |
-    python setup.py --cxx=$CXX_COMPILER \
+    pipenv run python setup.py --cxx=$CXX_COMPILER \
                     --cc=$C_COMPILER \
                     --fc=$Fortran_COMPILER \
                     --type=$BUILD_TYPE \
@@ -126,8 +121,8 @@ script:
                     --prefix=$HOME/Software/pcmsolver
   - cd build
   - ../.ci/ci_build.sh
-  - travis_wait 40 python ../.ci/ci_test.py ctest --output-on-failure --verbose --parallel 2
-  - python ../.ci/ci_print_failing.py
+  - travis_wait 40 pipenv run python ../.ci/ci_test.py ctest --output-on-failure --verbose --parallel 2
+  - pipenv run python ../.ci/ci_print_failing.py
 after_success:
   - |
     if [[ "$COVERAGE" = "--coverage" ]]; then

Pipfile.lock

@@ -1,6 +1,6 @@
 /*
  * PCMSolver, an API for the Polarizable Continuum Model
- * Copyright (C) 2018 Roberto Di Remigio, Luca Frediani and contributors.
+ * Copyright (C) 2019 Roberto Di Remigio, Luca Frediani and contributors.
  *
  * This file is part of PCMSolver.
  *

api/PCMInput.h

@@ -1,6 +1,6 @@
 !
 ! PCMSolver, an API for the Polarizable Continuum Model
-! Copyright (C) 2018 Roberto Di Remigio, Luca Frediani and contributors.
+! Copyright (C) 2019 Roberto Di Remigio, Luca Frediani and contributors.
 !
 ! This file is part of PCMSolver.
 !

api/pcmsolver.f90

@@ -1,6 +1,6 @@
 /*
  * PCMSolver, an API for the Polarizable Continuum Model
- * Copyright (C) 2018 Roberto Di Remigio, Luca Frediani and contributors.
+ * Copyright (C) 2019 Roberto Di Remigio, Luca Frediani and contributors.
  *
  * This file is part of PCMSolver.
  *

api/pcmsolver.h

@@ -1,6 +1,6 @@
 #
 #  PCMSolver, an API for the Polarizable Continuum Model
-#  Copyright (C) 2018 Roberto Di Remigio, Luca Frediani and contributors.
+#  Copyright (C) 2019 Roberto Di Remigio, Luca Frediani and contributors.
 #
 #  This file is part of PCMSolver.
 #

doc/cloc_tools/cloc_wrapper.py

@@ -1,6 +1,6 @@
 #
 #  PCMSolver, an API for the Polarizable Continuum Model
-#  Copyright (C) 2018 Roberto Di Remigio, Luca Frediani and contributors.
+#  Copyright (C) 2019 Roberto Di Remigio, Luca Frediani and contributors.
 #
 #  This file is part of PCMSolver.
 #