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test/ubic/basecode/math/linearmodels/ModeratedTstatTest.java
@@ -361,10 +361,13 @@ public void testSqueezeVarWMissing() {
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@Test
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public void testSqueezeVarB() throws Exception {
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DoubleMatrixReader f = new DoubleMatrixReader();
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+
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+ // variances from limma
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DoubleMatrix<String, String> testMatrix = f.read(new GZIPInputStream(this.getClass().getResourceAsStream(
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"/data/test-vars.gz")));
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DoubleMatrix1D vars = new DenseDoubleMatrix1D(testMatrix.getColumn(0));
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DoubleMatrix1D df1s = new DenseDoubleMatrix1D(vars.size());
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df1s.assign(a -> 6);
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double[] actual = ModeratedTstat.fitFDist(vars, df1s);
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double[] expected = new double[]{0.031699809959242764013,1.5383043501108832896};
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