Ready for 0.8.2 release

Author: jrfaeder

.gitignore

@@ -6,4 +6,7 @@ tests/viz/*
 tests/models/cli_test_runs/*
 bionetgen/bng-*
 temp_testing/*
-.vscode/*
+.vscode/*
+build
+dist
+Issues/rule_keywords/test_DeleteMolecules_changed.bngl

CHANGELOG.md

@@ -230,4 +230,7 @@ Behavior change, now most calls to `BNG2.pl` won't result in verbose output, the
 Updated underlying BNG and NFsim versions, expanded documentation and preparing for a full release.
 
 ## 0.8.1
-Updated underlying BNG and NFsim versions.
+Updated underlying BNG and NFsim versions.
+
+## 0.8.2
+Fixed bug in reading `DeleteMolecules` keyword when multiple molecules were deleted at once. Also, first installment of cleaning up constructor functions for model elements to allow programmatic model building (as opposed to just reading from BNGL file).

Issues/rule_keywords/test_DeleteMolecules.bngl

@@ -21,5 +21,5 @@ begin reaction rules
 end reaction rules
 end model
 
-#writeModel({suffix=>"changed",evaluate_expressions=>1,overwrite=>1})
-writeXML()
+writeModel({suffix=>"changed",evaluate_expressions=>1,overwrite=>1})
+#writeXML()

bionetgen/assets/VERSION

@@ -1 +1 @@
-0 8 1 alpha 0
+0 8 2 alpha 0