pyDiffusion_LeeLab/requirements.txt at main · TheLeeLab/pyDiffusion_LeeLab · GitHub

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alabaster==0.7.16
anyio==4.9.0
argon2-cffi==23.1.0
argon2-cffi-bindings==21.2.0
arrow==1.3.0
asttokens==3.0.0
async-lru==2.0.5
attrs==25.3.0
autodocsumm==0.2.14
babel==2.17.0
beautifulsoup4==4.13.4
bleach==6.2.0
certifi==2025.4.26
cffi==1.17.1
charset-normalizer==3.4.2
comm==0.2.2
contourpy==1.3.2
cycler==0.12.1
debugpy==1.8.14
decorator==5.2.1
defusedxml==0.7.1
dill==0.4.0
docutils==0.21.2
exceptiongroup==1.3.0
executing==2.2.0
fastjsonschema==2.21.1
fonttools==4.58.1
fqdn==1.5.1
h11==0.16.0
httpcore==1.0.9
httpx==0.28.1
idna==3.10
imagesize==1.4.1
ipykernel==6.29.5
ipython==9.2.0
ipython_pygments_lexers==1.1.1
isoduration==20.11.0
jedi==0.19.2
Jinja2==3.1.6
json5==0.12.0
jsonpointer==3.0.0
jsonschema==4.24.0
jsonschema-specifications==2025.4.1
jupyter-events==0.12.0
jupyter-lsp==2.2.5
jupyter_client==8.6.3
jupyter_core==5.8.1
jupyter_server==2.16.0
jupyter_server_terminals==0.5.3
jupyterlab==4.4.3
jupyterlab_pygments==0.3.0
jupyterlab_server==2.27.3
kiwisolver==1.4.8
llvmlite==0.44.0
MarkupSafe==3.0.2
matplotlib==3.10.3
matplotlib-inline==0.1.7
mistune==3.1.3
multiprocess==0.70.18
nbclient==0.10.2
nbconvert==7.16.6
nbformat==5.10.4
nest-asyncio==1.6.0
notebook==7.4.3
notebook_shim==0.2.4
numba==0.61.2
numpy==2.2.6
overrides==7.7.0
packaging==25.0
pandas==2.2.3
pandocfilters==1.5.1
parso==0.8.4
pathos==0.3.4
pexpect==4.9.0
pillow==11.2.1
platformdirs==4.3.8
pox==0.3.6
ppft==1.7.7
prometheus_client==0.22.0
prompt_toolkit==3.0.51
psutil==7.0.0
ptyprocess==0.7.0
pure_eval==0.2.3
pycparser==2.22
Pygments==2.19.1
pyparsing==3.2.3
python-dateutil==2.9.0.post0
python-json-logger==3.3.0
pytz==2025.2
PyYAML==6.0.2
pyzmq==26.4.0
referencing==0.36.2
requests==2.32.3
rfc3339-validator==0.1.4
rfc3986-validator==0.1.1
roman-numerals-py==3.1.0
rpds-py==0.25.1
scipy==1.15.3
Send2Trash==1.8.3
setuptools==80.9.0
six==1.17.0
sniffio==1.3.1
snowballstemmer==3.0.1
soupsieve==2.7
Sphinx==8.2.3
sphinx-rtd-theme==3.0.2
sphinxcontrib-applehelp==2.0.0
sphinxcontrib-devhelp==2.0.0
sphinxcontrib-htmlhelp==2.1.0
sphinxcontrib-jquery==4.1
sphinxcontrib-jsmath==1.0.1
sphinxcontrib-qthelp==2.0.0
sphinxcontrib-serializinghtml==2.0.0
stack-data==0.6.3
terminado==0.18.1
tinycss2==1.4.0
tomli==2.2.1
tornado==6.5.1
traitlets==5.14.3
types-python-dateutil==2.9.0.20250516
typing_extensions==4.13.2
tzdata==2025.2
uri-template==1.3.0
urllib3==2.4.0
wcwidth==0.2.13
webcolors==24.11.1
webencodings==0.5.1
websocket-client==1.8.0