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Updated Requirements
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Lines changed: 131 additions & 107 deletions

Example_MSD_OLSF_Analysis.ipynb

Lines changed: 40 additions & 19 deletions
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requirements.txt

Lines changed: 91 additions & 88 deletions
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@@ -1,125 +1,128 @@
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alabaster==0.7.16
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anyio==4.3.0
2+
anyio==4.9.0
33
argon2-cffi==23.1.0
44
argon2-cffi-bindings==21.2.0
55
arrow==1.3.0
6-
asttokens==2.4.1
7-
async-lru==2.0.4
8-
attrs==23.2.0
9-
autodocsumm==0.2.12
10-
Babel==2.14.0
11-
beautifulsoup4==4.12.3
12-
bleach==6.1.0
13-
certifi==2024.2.2
14-
cffi==1.16.0
15-
charset-normalizer==3.3.2
6+
asttokens==3.0.0
7+
async-lru==2.0.5
8+
attrs==25.3.0
9+
autodocsumm==0.2.14
10+
babel==2.17.0
11+
beautifulsoup4==4.13.4
12+
bleach==6.2.0
13+
certifi==2025.4.26
14+
cffi==1.17.1
15+
charset-normalizer==3.4.2
1616
comm==0.2.2
17-
contourpy==1.2.1
17+
contourpy==1.3.2
1818
cycler==0.12.1
19-
debugpy==1.8.1
20-
decorator==5.1.1
19+
debugpy==1.8.14
20+
decorator==5.2.1
2121
defusedxml==0.7.1
22-
dill==0.3.8
23-
docutils==0.20.1
24-
exceptiongroup==1.2.1
25-
executing==2.0.1
26-
fastjsonschema==2.19.1
27-
fonttools==4.51.0
22+
dill==0.4.0
23+
docutils==0.21.2
24+
exceptiongroup==1.3.0
25+
executing==2.2.0
26+
fastjsonschema==2.21.1
27+
fonttools==4.58.1
2828
fqdn==1.5.1
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h11==0.14.0
30-
httpcore==1.0.5
31-
httpx==0.27.0
32-
idna==3.7
29+
h11==0.16.0
30+
httpcore==1.0.9
31+
httpx==0.28.1
32+
idna==3.10
3333
imagesize==1.4.1
34-
ipykernel==6.29.4
35-
ipython==8.23.0
34+
ipykernel==6.29.5
35+
ipython==9.2.0
36+
ipython_pygments_lexers==1.1.1
3637
isoduration==20.11.0
37-
jedi==0.19.1
38-
Jinja2==3.1.3
39-
json5==0.9.25
40-
jsonpointer==2.4
41-
jsonschema==4.21.1
42-
jsonschema-specifications==2023.12.1
43-
jupyter-events==0.10.0
38+
jedi==0.19.2
39+
Jinja2==3.1.6
40+
json5==0.12.0
41+
jsonpointer==3.0.0
42+
jsonschema==4.24.0
43+
jsonschema-specifications==2025.4.1
44+
jupyter-events==0.12.0
4445
jupyter-lsp==2.2.5
45-
jupyter_client==8.6.1
46-
jupyter_core==5.7.2
47-
jupyter_server==2.14.0
46+
jupyter_client==8.6.3
47+
jupyter_core==5.8.1
48+
jupyter_server==2.16.0
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jupyter_server_terminals==0.5.3
49-
jupyterlab==4.1.6
50+
jupyterlab==4.4.3
5051
jupyterlab_pygments==0.3.0
51-
jupyterlab_server==2.27.1
52-
kiwisolver==1.4.5
53-
llvmlite==0.42.0
54-
MarkupSafe==2.1.5
55-
matplotlib==3.8.4
52+
jupyterlab_server==2.27.3
53+
kiwisolver==1.4.8
54+
llvmlite==0.44.0
55+
MarkupSafe==3.0.2
56+
matplotlib==3.10.3
5657
matplotlib-inline==0.1.7
57-
mistune==3.0.2
58-
multiprocess==0.70.16
59-
nbclient==0.10.0
60-
nbconvert==7.16.3
58+
mistune==3.1.3
59+
multiprocess==0.70.18
60+
nbclient==0.10.2
61+
nbconvert==7.16.6
6162
nbformat==5.10.4
6263
nest-asyncio==1.6.0
63-
notebook==7.1.3
64+
notebook==7.4.3
6465
notebook_shim==0.2.4
65-
numba==0.59.1
66-
numpy==1.26.4
66+
numba==0.61.2
67+
numpy==2.2.6
6768
overrides==7.7.0
68-
packaging==24.0
69-
pandas==2.2.2
69+
packaging==25.0
70+
pandas==2.2.3
7071
pandocfilters==1.5.1
7172
parso==0.8.4
72-
pathos==0.3.2
73+
pathos==0.3.4
7374
pexpect==4.9.0
74-
pillow==10.3.0
75-
platformdirs==4.2.1
76-
pox==0.3.4
77-
ppft==1.7.6.8
78-
prometheus_client==0.20.0
79-
prompt-toolkit==3.0.43
80-
psutil==5.9.8
75+
pillow==11.2.1
76+
platformdirs==4.3.8
77+
pox==0.3.6
78+
ppft==1.7.7
79+
prometheus_client==0.22.0
80+
prompt_toolkit==3.0.51
81+
psutil==7.0.0
8182
ptyprocess==0.7.0
82-
pure-eval==0.2.2
83+
pure_eval==0.2.3
8384
pycparser==2.22
84-
Pygments==2.17.2
85-
pyparsing==3.1.2
85+
Pygments==2.19.1
86+
pyparsing==3.2.3
8687
python-dateutil==2.9.0.post0
87-
python-json-logger==2.0.7
88-
pytz==2024.1
89-
PyYAML==6.0.1
90-
pyzmq==26.0.2
91-
referencing==0.35.0
92-
requests==2.31.0
88+
python-json-logger==3.3.0
89+
pytz==2025.2
90+
PyYAML==6.0.2
91+
pyzmq==26.4.0
92+
referencing==0.36.2
93+
requests==2.32.3
9394
rfc3339-validator==0.1.4
9495
rfc3986-validator==0.1.1
95-
rpds-py==0.18.0
96-
scipy==1.13.0
96+
roman-numerals-py==3.1.0
97+
rpds-py==0.25.1
98+
scipy==1.15.3
9799
Send2Trash==1.8.3
98-
six==1.16.0
100+
setuptools==80.9.0
101+
six==1.17.0
99102
sniffio==1.3.1
100-
snowballstemmer==2.2.0
101-
soupsieve==2.5
102-
Sphinx==7.3.7
103-
sphinx-rtd-theme==2.0.0
104-
sphinxcontrib-applehelp==1.0.8
105-
sphinxcontrib-devhelp==1.0.6
106-
sphinxcontrib-htmlhelp==2.0.5
103+
snowballstemmer==3.0.1
104+
soupsieve==2.7
105+
Sphinx==8.2.3
106+
sphinx-rtd-theme==3.0.2
107+
sphinxcontrib-applehelp==2.0.0
108+
sphinxcontrib-devhelp==2.0.0
109+
sphinxcontrib-htmlhelp==2.1.0
107110
sphinxcontrib-jquery==4.1
108111
sphinxcontrib-jsmath==1.0.1
109-
sphinxcontrib-qthelp==1.0.7
110-
sphinxcontrib-serializinghtml==1.1.10
112+
sphinxcontrib-qthelp==2.0.0
113+
sphinxcontrib-serializinghtml==2.0.0
111114
stack-data==0.6.3
112115
terminado==0.18.1
113-
tinycss2==1.3.0
114-
tomli==2.0.1
115-
tornado==6.4
116+
tinycss2==1.4.0
117+
tomli==2.2.1
118+
tornado==6.5.1
116119
traitlets==5.14.3
117-
types-python-dateutil==2.9.0.20240316
118-
typing_extensions==4.11.0
119-
tzdata==2024.1
120+
types-python-dateutil==2.9.0.20250516
121+
typing_extensions==4.13.2
122+
tzdata==2025.2
120123
uri-template==1.3.0
121-
urllib3==2.2.1
124+
urllib3==2.4.0
122125
wcwidth==0.2.13
123-
webcolors==1.13
126+
webcolors==24.11.1
124127
webencodings==0.5.1
125128
websocket-client==1.8.0
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