Dockerfile.flask

FROM python:3.8

MAINTAINER Fabian Sinz <sinz@bcm.com>, Cameron Smith <camerons@bcm.edu>, Christos Papadopoulos <cpapadop@bcm.com>

# Defines where the app will be run from
ENV APP /app

RUN mkdir $APP
WORKDIR $APP

# Expose the port uWSGI will listen on
EXPOSE 5000

# Install ubuntu packages
RUN apt-get update
# RUN apt install -y graphviz libffi6 libffi-dev libssl-dev
ARG DEBIAN_FRONTEND=noninteractive
ENV TZ=America/Chicago
RUN apt-get install -y tzdata

# Upgrade pip
RUN pip3 install --upgrade pip

# Copy and install Python dependencies
COPY requirements.txt .
RUN pip3 install --upgrade setuptools # otherwise cairocffi cannot be installed (https://github.com/lief-project/LIEF/issues/108)
RUN pip3 install --upgrade git+https://github.com/atlab/datajoint-python
RUN pip3 install -r requirements.txt

# We copy the rest of the codebase into the image
COPY . .

# Run uWSGI with its ini file.
# Might be better to use entrypoint here?
CMD [ "uwsgi", "--enable-threads", "--ini", "app.ini" ]