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# scater_tutorials_open_data
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A set of tutorials using the scater package to QC publicly available single-cell expression data sets
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# `scater` tutorials with open-access data
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A set of tutorials using the scater package to QC publicly available
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single-cell expression data sets
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## Do it yourself
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Clone this repository to access analyses of open-access single-cell
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expression data in R Markdown format so that you can experience the
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utility of `scater` and prepare single-cell expression datasets for
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your own exploration.
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Navigate to your favourite directory and clone:
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```
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git clone https://github.com/davismcc/scater_tutorials_open_data.git
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```
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Or you can download the zipped version of the repository from this
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page.
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## See what it looks like
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Check out the results of the analyses in these HTML reports produced
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with R Markdown showing code and results.
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* Analysis of
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[Zeisel et al, 2015](http://science.sciencemag.org/content/347/6226/1138)
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data can be seen [here](). Kudos to the authors of that study who
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have made their data available at the
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[Linnarsson Lab website](http://linnarssonlab.org/blobs/cortex/).
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* More to follow...
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Davis McCarthy, February 2016

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