last commit using pelican as a static site generator

Author: ducarme

content/code/start_springable.py

@@ -0,0 +1,3 @@
+from springable.simulation import simulate_model
+
+simulate_model('my_spring_model.csv')

content/pages/research.md

@@ -1,11 +1,36 @@
 Title: Research
 Save_as: index.html
 
-I'm a researcher interested in nonlinear mechanics and metamaterials! I seek a deeper understanding of the interplay between
+I'm a researcher{% sidenote 'side-note-id' 'PhD candidate at AMOLF' %}
+ interested in nonlinear mechanics and metamaterials
+ <!-- {% marginnote 'margin-note-id' 'margin-note' %} -->
+! I seek a deeper understanding of the interplay between
 geometry and elasticity in structures. In particular, I'm focusing on harnessing instabilities to embed complex behaviors
+<!-- {% marginfigure 'margin-figure-id' 'https://placehold.jp/300x300.png' 'this is the caption' ['alternate image text'] %} -->
 and functions in mechanical systems.
+{% fullwidth 'https://placehold.jp/640x480.png' 'Caption for the image' ['alternate image text']%}
 
-What structural design lead to a given functionality? Can we find
+
+{% newthought Start of new paragraph %} What structural design lead to a given functionality? Can we find
 the building blocks to assemble to form a structure with a desired deformation path?
 
+Here is a YT video
+
+{% youtube KxtkcL0z5j0 %}
+
+what do you think?
+
+A new sound is something that really changes the way you look at the world and maybe decide your next career.
+
+
+<!-- {% audio 'http://commondatastorage.googleapis.com/codeskulptor-assets/Epoq-Lepidoptera.ogg' %} -->
+
+
+Ok? Nice?
+Text2
+{% include_code start_springable.py lang:python :hideall: %}
+bonjour
+
+
+
 

content/publications/countersnapping.md

@@ -7,4 +7,8 @@ Date: 2025
 Link: https://www.pnas.org/doi/10.1073/pnas.2423301122
 Image: https://placehold.jp/300x300.png
 
-Mechanical snapping instabilities are leveraged by natural systems, metamaterials, and devices for rapid sensing, actuation, and shape changes, as well as to absorb impact. In all current forms of snapping, shapes deform in the same direction as the exerted forces, even though there is no physical law that dictates this. Here, we realize countersnapping mechanical structures that respond in the opposite way. In contrast to regular snapping, countersnapping manifests itself in a sudden shortening transition under increasing tension or a sudden increase in tensile force under increasing extension. We design these structures by combining basic flexible building blocks that leverage geometric nonlinearities. We demonstrate experimentally that countersnapping can be employed to obtain new exotic properties, such as unidirectional stick–slip motion, switchable stiffness that does not otherwise affect the state of the system, and passive resonance avoidance. Moreover, we demonstrate that combining multiple countersnapping elements allows sequential stiffness switching for elements coupled in parallel, or instantaneous collective switching for elements in series. By expanding the repertoire of realizable elastic instabilities, our work opens routes to principles for mechanical sensing, computation, and actuation.
+Mechanical snapping instabilities. This is a sidenote with a reference are leveraged by natural systems, metamaterials, and devices for rapid sensing, actuation, and shape changes, as well as to absorb impact. In all current forms of snapping, shapes deform in the same direction as the exerted forces, even though there is no physical law that dictates this. Here, we realize countersnapping mechanical structures that respond in the opposite way. In contrast to regular snapping, countersnapping manifests itself in a sudden shortening transition under increasing tension or a[^1] sudden increase in tensile force under increasing extension. We design these structures by combining basic flexible building blocks that leverage geometric nonlinearities. We demonstrate experimentally that countersnapping can be employed to obtain new exotic properties, such as unidirectional stick–slip motion, switchable stiffness that does not otherwise affect the state of the system, and passive resonance avoidance. Moreover, we demonstrate that combining multiple countersnapping elements allows sequential stiffness switching for elements coupled in parallel, or instantaneous collective switching for elements in series. This is a margin note.
+. By expanding the repertoire of realizable elastic instabilities, our work opens routes to principles for mechanical sensing, computation, and actuation.
+
+
+[^1]: This is the footnote text.

pelicanconf.py

@@ -12,13 +12,24 @@
 
 DEFAULT_LANG = 'EN'
 
+PLUGIN_PATHS = ['plugins']
+PLUGINS = ['tufte_liquid_tags']
+
+LIQUID_TAGS = ["img", "literal", "youtube", "audio", "include_code"]
+YOUTUBE_THUMB_ONLY = True
+YOUTUBE_THUMB_SIZE = 'mq'
+CODE_DIR = 'code'
+NOTEBOOK_DIR = 'notebooks'
+
+
 # Feed generation is usually not desired when developing
 FEED_ALL_ATOM = None
 CATEGORY_FEED_ATOM = None
 TRANSLATION_FEED_ATOM = None
 AUTHOR_FEED_ATOM = None
 AUTHOR_FEED_RSS = None
 
+
 # Blogroll
 LINKS = (
     ('AMOLF', 'https://amolf.nl/'),

plugins/__init__.py

@@ -0,0 +1,188 @@
+"""
+Sidenote and Margin Tags
+----------
+This implements a Liquid-style tags margin and side notes
+for Pelican
+
+Syntax
+------
+
+{% newthought 'Start of new paragraph' %}
+{% sidenote 'side-note-id' 'side-note' %}
+{% marginnote 'margin-note-id' 'margin-note' %}
+{% marginfigure 'margin-figure-id' 'path/to/image' 'this is the caption' ['alternate image text'] %}
+{% fullwidth 'path/to/image' 'Caption for the image' ['alternate image text']%}
+Output
+------
+<label for="margin-note-id" class="margin-toggle">+</label>
+<input type="checkbox" id="margin-note-id" class="margin-toggle" />
+<span class="marginnote">'margin-note'</span>
+
+"""
+import re
+from pelican.plugins.liquid_tags.mdx_liquid_tags import LiquidTags
+
+NEWTHOUGHTSYNTAX = '''{% newthought some text %}'''
+newthought_RE = re.compile('''(?P<newthought_text>.*)''')
+
+MARGINSYNTAX = '''{% marginnote ["margin-note-id"|'margin-note-id'] ["margin-note-id"|'margin-note-id']%}'''
+marginnote_RE = re.compile(r'''(?:"|')(?P<marginid>[^"']+)(?:"|')\s+(?:"|')(?P<marginnote>[^"']+)(?:"|')''')
+
+SIDESYNTAX = '''{% sidenote ["side-note-id"|'side-note-id'] ["side-note-id"|'side-note-id']%}'''
+sidenote_RE = re.compile(r'''(?:"|')(?P<sideid>[^"']+)(?:"|')\s+(?:"|')(?P<sidenote>[^"']+)(?:"|')''')
+
+FULLWIDTHSYNTAX = '''{% fullwidth [https?:/]/path/to/image "image caption"%}'''
+fullwidth_RE = re.compile(r'''(?:"|')(?P<fullwidth_image_path>[^"']+)(?:"|')\s+(?:"|')(?P<fullwidth_image_caption>[^"']+)(?:"|')''')
+
+MAINCOLUMNSYNTAX = '''{% maincolumn "[https?:/]/path/to/image" "image caption" %}'''
+maincolumn_RE = re.compile(r'''((['"])(?P<maincolumn_image_path>.*)([^\1]))\s+((['"])(?P<maincolumn_image_caption>.*)([^\4]))''')
+
+MARGINFIGURESYNTAX = '''{% marginfigure "marginfigure_id" "[https?:/]/path/to/image" "image caption"%}'''
+marginfigure_RE = re.compile(r'''((['"])(?P<marginfigure_id>.*)([^\1]))\s+((['"])(?P<marginfigure_image_path>.*)([^\4]))\s+((['"])(?P<marginfigure_image_caption>.*)([^\7]))''')
+
+@LiquidTags.register('marginnote')
+def marginnote(preprocessor, tag, markup):
+    marginnote_attrs = None
+
+    # Parse the markup string
+    marginnote_match = marginnote_RE.search(markup)
+    if marginnote_match:
+        marginnote_attrs = marginnote_match.groupdict()
+    else:
+        raise ValueError('Error processing input. '
+                         'Expected syntax: {0}'.format(MARGINSYNTAX))
+
+    marginnote_html = '''<label for="''' + marginnote_attrs['marginid']
+    marginnote_html += '''" class="margin-toggle">&#8853;</label>'''
+    marginnote_html += '''<input type="checkbox" id="'''
+    marginnote_html += marginnote_attrs['marginid'] 
+    marginnote_html += '''" class="margin-toggle" />'''
+    marginnote_html += '''<span class="marginnote">'''
+    marginnote_html += marginnote_attrs['marginnote']
+    marginnote_html += '''</span>'''
+
+    return marginnote_html
+
+
+@LiquidTags.register('sidenote')
+def sidenote(preprocessor, tag, markup):
+    sidenote_attrs = None
+
+    # Parse the markup string
+    sidenote_match = sidenote_RE.search(markup)
+    if sidenote_match:
+        sidenote_attrs = sidenote_match.groupdict()
+    else:
+        raise ValueError('Error processing input. '
+                         'Expected syntax: {0}'.format(SIDESYNTAX))
+
+    sidenote_html = '''<label for="''' + sidenote_attrs['sideid']
+    #This is the difference between sidenote and margin note
+    sidenote_html += '''" class="margin-toggle sidenote-number"></label>'''
+    sidenote_html += '''<input type="checkbox" id="'''
+    sidenote_html += sidenote_attrs['sideid'] 
+    sidenote_html += '''" class="margin-toggle" />'''
+    sidenote_html += '''<span class="sidenote">'''
+    sidenote_html += sidenote_attrs['sidenote']
+    sidenote_html += '''</span>'''
+
+    return sidenote_html
+
+
+@LiquidTags.register('newthought')
+def newthought(preprocessor, tag, markup):
+    newthought_attrs = None
+
+    # Parse the markup string
+    newthought_match = newthought_RE.search(markup)
+    if newthought_match:
+        newthought_attrs = newthought_match.groupdict()
+    else:
+        raise ValueError('Error processing input. '
+                         'Expected syntax: {0}'.format(NEWTHOUGHTSYNTAX))
+
+    newthought_html = '''<span class='newthought'>''' 
+    newthought_html += newthought_attrs['newthought_text']
+    newthought_html += '''</span>'''
+
+    return newthought_html
+
+@LiquidTags.register('fullwidth')
+def fullwidth(preprocessor, tag, markup):
+    fullwidth_attrs = None
+
+    # Parse the markup string
+    fullwidth_match = fullwidth_RE.search(markup)
+    if fullwidth_match:
+        fullwidth_attrs = fullwidth_match.groupdict()
+    else:
+        raise ValueError('Error processing fullwidth input.'
+                         'Expected syntax: {0}'.format(FULLWIDTHSYNTAX))
+
+    fullwidth_html = '''<figure class="fullwidth">'''
+    fullwidth_html += '''<img src="'''
+    fullwidth_html += fullwidth_attrs['fullwidth_image_path']
+    fullwidth_html += '''">'''
+    fullwidth_html += '''<figcaption>'''
+    fullwidth_html += fullwidth_attrs['fullwidth_image_caption']
+    fullwidth_html += '''</figcation></figure>'''
+
+    return fullwidth_html
+
+
+@LiquidTags.register('maincolumn')
+def maincolumn(preprocessor, tag, markup):
+    maincolumn_attrs = None
+
+    # Parse the markup string
+    maincolumn_match = maincolumn_RE.search(markup)
+    if maincolumn_match:
+        maincolumn_attrs = maincolumn_match.groupdict()
+    else:
+        raise ValueError('Error processing maincolumn input. '
+                         'Expected syntax: {0}'.format(MAINCOLUMNSYNTAX))
+
+    maincolumn_html = '''<figure>'''
+    maincolumn_html += '''<figcaption>'''
+    maincolumn_html += maincolumn_attrs['maincolumn_image_caption']
+    maincolumn_html += '''</figcaption>'''
+    maincolumn_html += '''<img src="'''
+    maincolumn_html += maincolumn_attrs['maincolumn_image_path']
+    maincolumn_html += '''"/></figure>'''
+    
+    return maincolumn_html
+
+
+@LiquidTags.register('marginfigure')
+def marginfigure(preprocessor, tag, markup):
+    marginfigure_attrs = None
+
+    # Parse the markup string
+    marginfigure_match = marginfigure_RE.search(markup)
+    if marginfigure_match:
+        marginfigure_attrs = marginfigure_match.groupdict()
+    else:
+        raise ValueError('Error processing marginfigure input. \n'
+                         'Expected syntax: {0}'.format(MARGINFIGURESYNTAX))
+
+    marginfigure_html = '''<label for="''' + marginfigure_attrs['marginfigure_id']
+    marginfigure_html += '''" class="margin-toggle">&#8853;</label>'''
+    marginfigure_html += '''<input type="checkbox" id="'''
+    marginfigure_html += marginfigure_attrs['marginfigure_id'] 
+    marginfigure_html += '''" class="margin-toggle" />'''
+    marginfigure_html += '''<span class="marginnote">'''
+    marginfigure_html += '''<img class="fullwidth" src="'''
+    marginfigure_html += marginfigure_attrs['marginfigure_image_path']
+    marginfigure_html += '''" alt="'''
+    marginfigure_html += marginfigure_attrs['marginfigure_image_caption']
+    marginfigure_html += '''"/><br/>'''
+    marginfigure_html += marginfigure_attrs['marginfigure_image_caption']
+    marginfigure_html += '''</span>'''
+
+    return marginfigure_html
+
+
+
+#----------------------------------------------------------------------
+# This import allows Tufte tags to be a Pelican plugin
+from pelican.plugins.liquid_tags import register

plugins/tufte_liquid_tags.py

@@ -1 +1,2 @@
-pelican[markdown]
+pelican[markdown]
+pelican-liquid-tags