DESCRIPTION

Package: mscleanr
Type: Package
Title: Cleans MS Data for Easier Analyses
Version: 1.0
Authors@R: c(
    person("Ophélie", "Fraisier-Vannier", email = "ophelie.fraisier-vannier@univ-tlse3.fr", role = "aut"),
    person("Guillaume", "Marti", email = "guillaume.marti@univ-tlse3.fr", role = "cre"),
    person("Guillaume", "Cabanac", email = "guillaume.cabanac@univ-tlse3.fr", role = "aut"))
Description: Cleans MS Data for easier and faster analyses:
    Combine pos and neg files from MS-DIAL and filter peaks according to user parameters.
    Filter cleaned peaks based on various criteria.
    Annotates peaks based on files extracted from MS-FINDER.
    Convert CSV peaks data to MSP format.
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends:
    R (>= 2.10)
Imports:
    magrittr (>= 1.5),
    rlang (>= 0.4.2),
    crayon (>= 1.3.4),
    splitstackshape (>= 1.4.8),
    stringr (>= 1.4.0),
    reshape2 (>= 1.4.3),
    MScombine (>= 1.4),
    data.table (>= 1.12.8),
    lazyeval (>= 0.2.2),
    igraph (>= 1.2.4.2),
    dplyr (>= 0.8.3),
    Hmisc (>= 4.3-0),
    gtools (>= 3.8.1),
    fuzzyjoin (>= 0.1.5),
    shiny (>= 1.4.0),
    shinythemes (>= 1.1.2),
    shinyFiles (>= 0.7.5),
    fs (>= 1.3.1),
    shinyjs (>= 1.0),
    waiter (>= 0.0.6),
    tools (>= 3.5.3),
    vroom (>= 1.0.2)
Suggests: 
    rmarkdown
RoxygenNote: 7.0.2