merge wroc experiment

Author: elichad

…rkflow-ro-crate/must/0_main-workflow.ttl …es/workflow-ro-crate/0_main-workflow.ttlrocrate_validator/profiles/workflow-ro-crate/must/0_main-workflow.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/0_main-workflow.ttl rocrate_validator/profiles/workflow-ro-crate/must/0_main-workflow.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/0_main-workflow.ttl

@@ -20,6 +20,8 @@
 @prefix schema: <http://schema.org/> .
 @prefix sh: <http://www.w3.org/ns/shacl#> .
 @prefix validator: <https://github.com/crs4/rocrate-validator/> .
+@prefix wroc: <https://w3id.org/workflowhub/workflow-ro-crate#> .
+
 
 workflow-ro-crate:MainEntityPropertyMustExist a sh:NodeShape ;
     sh:name "Main Workflow entity existence" ;
@@ -31,6 +33,7 @@ workflow-ro-crate:MainEntityPropertyMustExist a sh:NodeShape ;
         sh:minCount 1 ;
         sh:description "Check if the Main Workflow is specified through a `mainEntity` property in the root data entity" ;
         sh:message "The Main Workflow must be specified through a `mainEntity` property in the root data entity" ;
+        sh:severity sh:Violation;
     ] .
 
 workflow-ro-crate:FindMainWorkflow a sh:NodeShape, validator:HiddenShape ;
@@ -70,6 +73,7 @@ workflow-ro-crate:MainWorkflowRequiredProperties a sh:NodeShape ;
                     bioschemas:ComputationalWorkflow ;
         sh:minCount 1 ;
         sh:message "The Main Workflow must have types File, SoftwareSourceCode, ComputationalWorkflow" ;
+        sh:severity sh:Violation;
     ] ;
     sh:property [
         a sh:PropertyShape ;
@@ -79,4 +83,54 @@ workflow-ro-crate:MainWorkflowRequiredProperties a sh:NodeShape ;
         sh:class schema:ComputerLanguage ;
         sh:minCount 1 ;
         sh:message "The Main Workflow must refer to its language via programmingLanguage" ;
+        sh:severity sh:Violation;
+    ] .
+
+
+workflow-ro-crate:MainWorkflowOptionalProperties a sh:NodeShape ;
+    sh:name "Main Workflow optional properties" ;
+    sh:description """Main Workflow properties defined as MAY""";
+    sh:targetClass workflow-ro-crate:MainWorkflow ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "Main Workflow image" ;
+        sh:description "The Crate MAY contain a Main Workflow Diagram; if present it MUST be referred to via 'image'" ;
+        sh:path schema:image ;
+        sh:class schema:MediaObject, schema:ImageObject ;
+        sh:minCount 1 ;
+        sh:message "The Crate MAY contain a Main Workflow Diagram; if present it MUST be referred to via 'image'" ;
+        sh:severity sh:Info ;
+    ] ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "Main Workflow subjectOf" ;
+        sh:description "The Crate MAY contain a Main Workflow CWL Description; if present it MUST be referred to via 'subjectOf'" ;
+        sh:path schema:subjectOf ;
+        sh:node workflow-ro-crate:CWLDescriptionProperties ;
+        sh:minCount 1 ;
+        sh:message "The Crate MAY contain a Main Workflow CWL Description; if present it MUST be referred to via 'subjectOf'" ;
+        sh:severity sh:Info ;
+    ] .
+
+workflow-ro-crate:CWLDescriptionProperties a sh:NodeShape ;
+    sh:name "CWL Description properties" ;
+    sh:description "Main Workflow CWL Description properties" ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "CWL Description type" ;
+        sh:description "The CWL Description type must be File, SoftwareSourceCode, HowTo" ;
+        sh:path rdf:type ;
+        sh:hasValue schema:MediaObject, schema:SoftwareSourceCode, schema:HowTo ;
+        sh:message "The CWL Description type must be File, SoftwareSourceCode, HowTo" ;
+        sh:severity sh:Info ;
+    ] ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "CWL Description language" ;
+        sh:description "The CWL Description SHOULD have a language of https://w3id.org/workflowhub/workflow-ro-crate#cwl" ;
+        sh:path schema:programmingLanguage ;
+        sh:hasValue wroc:cwl ;
+        sh:class schema:ComputerLanguage ;
+        sh:message "The CWL Description SHOULD have a language of https://w3id.org/workflowhub/workflow-ro-crate#cwl" ;
+        sh:severity sh:Info ;
     ] .

…orkflow-ro-crate/should/1_wroc_crate.ttl …files/workflow-ro-crate/1_wroc_crate.ttlrocrate_validator/profiles/workflow-ro-crate/should/1_wroc_crate.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/1_wroc_crate.ttl rocrate_validator/profiles/workflow-ro-crate/should/1_wroc_crate.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/1_wroc_crate.ttl

@@ -33,6 +33,7 @@ workflow-ro-crate:DescriptorProperties a sh:NodeShape ;
                     <https://w3id.org/workflowhub/workflow-ro-crate/1.0> ;
         sh:minCount 1 ;
         sh:message "The Metadata File Descriptor conformsTo SHOULD contain https://w3id.org/ro/crate/1.1 and https://w3id.org/workflowhub/workflow-ro-crate/1.0" ;
+        sh:severity sh:Warning;
     ] .
 
 workflow-ro-crate:FindReadme a sh:NodeShape ;
@@ -47,6 +48,7 @@ workflow-ro-crate:FindReadme a sh:NodeShape ;
         sh:class ro-crate:RootDataEntity ;
         sh:minCount 1 ;
         sh:message "The README.md SHOULD be about the crate" ;
+        sh:severity sh:Warning;
     ] ;
     sh:property [
         a sh:PropertyShape ;
@@ -56,4 +58,5 @@ workflow-ro-crate:FindReadme a sh:NodeShape ;
         sh:hasValue "text/markdown" ;
         sh:minCount 1 ;
         sh:message "The README.md SHOULD have text/markdown as its encodingFormat" ;
+        sh:severity sh:Warning;
     ] .

…o-crate/must/1_wroc_root_data_entity.ttl …low-ro-crate/1_wroc_root_data_entity.ttlrocrate_validator/profiles/workflow-ro-crate/must/1_wroc_root_data_entity.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/1_wroc_root_data_entity.ttl rocrate_validator/profiles/workflow-ro-crate/must/1_wroc_root_data_entity.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/1_wroc_root_data_entity.ttl

@@ -36,4 +36,5 @@ workflow-ro-crate:WROCRootDataEntityRequiredProperties a sh:NodeShape ;
         ) ;
         sh:minCount 1 ;
         sh:message "The Crate (Root Data Entity) must specify a license, which should be a URL but can also be a string" ;
+        sh:severity sh:Violation;
     ] .

…flow-ro-crate/should/2_main-workflow.ttl …es/workflow-ro-crate/2_main-workflow.ttlrocrate_validator/profiles/workflow-ro-crate/should/2_main-workflow.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/2_main-workflow.ttl rocrate_validator/profiles/workflow-ro-crate/should/2_main-workflow.ttl renamed to rocrate_validator/profiles/workflow-ro-crate/2_main-workflow.ttl

@@ -46,4 +46,5 @@ workflow-ro-crate:FindExamplesDir a sh:NodeShape ;
         sh:hasValue schema:Dataset ;
         sh:minCount 1 ;
         sh:message "The examples/ dir should be a Dataset" ;
+        sh:severity sh:Info;
     ] .