changed signature for dnaVerification method

Author: prem0862

src/main/java/gov/doe/jgi/boost/client/BOOSTClient.java

@@ -228,14 +228,14 @@ public String codonJuggle(
 	 */
 	public String dnaVarification(
 			final String filenameSequences, 
-			final String constraintsFilename, 
+			Vendor vendor, 
 			final String sequencePatternsFilename)
 				throws BOOSTClientException, BOOSTBackEndException, IOException {
 
 		// represent the request data in JSON and
 		// submit it to BOOST's Job Queue Management System (JQMS)
 		return submitJob(RequestBuilder.buildVerify(
-				filenameSequences, constraintsFilename, sequencePatternsFilename));
+				filenameSequences, vendor, sequencePatternsFilename));
 	}
 
 	/**

src/main/java/gov/doe/jgi/boost/client/RequestBuilder.java

@@ -165,14 +165,14 @@ public static JSONObject buildCodonJuggle(
 	 */
 	public static JSONObject buildVerify(
 			final String filenameSequences, 
-			final String constraintsFilename,
+			Vendor vendor,
 			final String sequencePatternsFilename)
 				throws BOOSTClientException, IOException {
 
 		//---------------------------------
 		// verify the given values
 		ParameterValueVerifier.verifyFilename(JSONKeys.SEQUENCE_INFORMATION, filenameSequences);
-		ParameterValueVerifier.verifyFilename(JSONKeys.CONSTRAINTS_INFORMATION, constraintsFilename);
+		ParameterValueVerifier.verifyNull(BOOSTConstants.VENDOR, vendor);
 		// the sequence patterns filename is optional
 		if(null != sequencePatternsFilename && !sequencePatternsFilename.trim().isEmpty()) {
 			ParameterValueVerifier.verifyFilename(JSONKeys.PATTERN_INFORMATION, sequencePatternsFilename);
@@ -202,8 +202,7 @@ public static JSONObject buildVerify(
 
 		//---------------------------------
 		// CONSTRAINTS
-		requestData.put(JSONKeys.CONSTRAINTS_INFORMATION,
-				RequestBuilder.buildConstraints(constraintsFilename));
+		requestData.put(JSONKeys.VENDOR_NAME, vendor);
 		//---------------------------------
 
 

src/test/java/gov/doe/jgi/boost/client/DemoClient.java

@@ -67,7 +67,7 @@ public static void main(String[] args)
     	// verify against DNA synthesis constraints and sequence patterns
 		String dnaVarificationJobUUID = client.dnaVarification(
 				"./data/dna.fasta",           // input sequence
-				"./data/constraints.scl",     // synthesis constraints
+				Vendor.GEN9,                  // vendor
 				"./data/patterns.fasta");     // sequence patterns
 		if (null != dnaVarificationJobUUID) {
 			jobUUIDs.add(dnaVarificationJobUUID);